Variant report

Variant	rs57355184
Chromosome Location	chr5:167618371-167618372
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:167617381..167620061-chr5:167621010..167623836,2	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10041718	0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10078128	0.85[ASN][1000 genomes]
rs17069979	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2173018	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2291784	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs57141803	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6875022	0.92[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6880386	0.86[EUR][1000 genomes]
rs6892072	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6898935	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7709334	0.86[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167592400-167626000	Weak transcription	HSMM	muscle
2	chr5:167606600-167626800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:167608600-167631800	Weak transcription	NH-A	brain
4	chr5:167609600-167619000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr5:167614400-167620400	Weak transcription	HSMMtube	muscle
6	chr5:167614600-167618800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr5:167614600-167620400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr5:167614600-167620600	Weak transcription	Fetal Brain Female	brain
9	chr5:167614800-167620600	Weak transcription	Stomach Smooth Muscle	stomach
10	chr5:167615800-167620000	Weak transcription	Brain Germinal Matrix	brain
11	chr5:167615800-167633800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr5:167615800-167646600	Weak transcription	Fetal Heart	heart
13	chr5:167616200-167619400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr5:167616200-167620600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr5:167617000-167618600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr5:167617000-167628200	Strong transcription	NHEK	skin
17	chr5:167617200-167618400	Genic enhancers	Left Ventricle	heart
18	chr5:167617200-167618800	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr5:167617200-167618800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr5:167617400-167618400	Strong transcription	Right Ventricle	heart
21	chr5:167617600-167619800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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