Variant report

Variant rs57378308
Chromosome Location chr2:39348346-39348347
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39344400-39348600 Active TSS GM12878-XiMat blood
2 chr2:39345200-39348800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr2:39345400-39348800 Active TSS Ovary ovary
4 chr2:39345400-39349200 Active TSS HUES6 Cell Line embryonic stem cell
5 chr2:39345600-39348400 Active TSS HUES48 Cell Line embryonic stem cell
6 chr2:39345600-39348600 Active TSS Aorta Aorta
7 chr2:39345800-39348600 Active TSS Left Ventricle heart
8 chr2:39345800-39348600 Active TSS K562 blood
9 chr2:39345800-39348800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:39345800-39348800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
11 chr2:39345800-39348800 Active TSS Colonic Mucosa Colon
12 chr2:39346000-39348400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:39346000-39348400 Active TSS Stomach Smooth Muscle stomach
14 chr2:39346000-39348400 Active TSS NHDF-Ad bronchial
15 chr2:39346000-39348600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:39346000-39348600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:39346000-39348600 Active TSS Sigmoid Colon Sigmoid Colon
18 chr2:39346000-39348600 Active TSS Small Intestine intestine
19 chr2:39346000-39348600 Bivalent/Poised TSS HepG2 liver
20 chr2:39346000-39348600 Active TSS HMEC breast
21 chr2:39346000-39348800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:39346000-39348800 Active TSS HSMMtube muscle
23 chr2:39346000-39349000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:39346000-39349000 Active TSS Fetal Muscle Trunk muscle
25 chr2:39346200-39348400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:39346200-39348400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr2:39346200-39348400 Active TSS Breast Myoepithelial Primary Cells Breast
28 chr2:39346200-39348400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr2:39346200-39348400 Active TSS Primary T helper naive cells from peripheral blood blood
30 chr2:39346200-39348400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr2:39346200-39348400 Active TSS Primary T killer memory cells from peripheral blood blood
32 chr2:39346200-39348400 Active TSS Muscle Satellite Cultured Cells --
33 chr2:39346200-39348400 Active TSS Fetal Lung lung
34 chr2:39346200-39348400 Active TSS Placenta Placenta
35 chr2:39346200-39348400 Active TSS Rectal Mucosa Donor 29 rectum
36 chr2:39346200-39348400 Active TSS Rectal Mucosa Donor 31 rectum
37 chr2:39346200-39348400 Active TSS Thymus Thymus
38 chr2:39346200-39348400 Active TSS NHEK skin
39 chr2:39346200-39348400 Active TSS NHLF lung
40 chr2:39346200-39348600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:39346200-39348600 Active TSS Brain Cingulate Gyrus brain
42 chr2:39346200-39348600 Active TSS Duodenum Mucosa Duodenum
43 chr2:39346200-39348600 Active TSS Fetal Intestine Small intestine
44 chr2:39346200-39348600 Active TSS Pancreatic Islets Pancreatic Islet
45 chr2:39346200-39348600 Active TSS Fetal Muscle Leg muscle
46 chr2:39346200-39348600 Active TSS Stomach Mucosa stomach
47 chr2:39346200-39348600 Active TSS Hela-S3 cervix
48 chr2:39346200-39348600 Active TSS Osteobl bone
49 chr2:39346200-39348800 Active TSS H9 Cell Line embryonic stem cell
50 chr2:39346200-39348800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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