The 2.0 version of rSNPBase

Variant report

Variant rs57394470
Chromosome Location chr13:49018039-49018040
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48990800-49030800 Weak transcription Ovary ovary
2 chr13:48991400-49018600 Weak transcription Thymus Thymus
3 chr13:48991400-49019200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr13:48991400-49030600 Weak transcription Spleen Spleen
5 chr13:48991800-49018800 Weak transcription Fetal Thymus thymus
6 chr13:48999000-49024400 Weak transcription Fetal Muscle Leg muscle
7 chr13:49001400-49022400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr13:49001400-49024600 Weak transcription Fetal Intestine Small intestine
9 chr13:49003600-49023200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr13:49006400-49018800 Weak transcription GM12878-XiMat blood
11 chr13:49006800-49020200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr13:49006800-49020400 Weak transcription HSMMtube muscle
13 chr13:49006800-49020800 Weak transcription Hela-S3 cervix
14 chr13:49006800-49030400 Weak transcription Brain Cingulate Gyrus brain
15 chr13:49007000-49027600 Weak transcription Primary T cells from cord blood blood
16 chr13:49008000-49028600 Weak transcription HepG2 liver
17 chr13:49008800-49030800 Weak transcription Placenta Placenta
18 chr13:49009000-49030600 Weak transcription Gastric stomach
19 chr13:49009000-49030600 Weak transcription Lung lung
20 chr13:49011200-49028800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr13:49011400-49022800 Weak transcription Primary hematopoietic stem cells blood
22 chr13:49011800-49020400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr13:49011800-49023600 Weak transcription Fetal Muscle Trunk muscle
24 chr13:49012000-49018600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr13:49012000-49019400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr13:49012000-49019800 Weak transcription HUVEC blood vessel
27 chr13:49012000-49020200 Weak transcription Primary monocytes fromperipheralblood blood
28 chr13:49012000-49020200 Weak transcription Muscle Satellite Cultured Cells --
29 chr13:49012000-49020400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr13:49012000-49020400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr13:49012000-49020400 Weak transcription NHLF lung
32 chr13:49012000-49020400 Weak transcription Osteobl bone
33 chr13:49012000-49020600 Weak transcription HSMM muscle
34 chr13:49012000-49020800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr13:49012000-49022400 Weak transcription Brain Anterior Caudate brain
36 chr13:49012000-49022800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr13:49012000-49023400 Weak transcription Small Intestine intestine
38 chr13:49012000-49027400 Weak transcription Left Ventricle heart
39 chr13:49012000-49028800 Weak transcription Pancreas Pancrea
40 chr13:49012200-49020400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr13:49012200-49020400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:49012200-49020400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr13:49012200-49020400 Weak transcription NHDF-Ad bronchial
44 chr13:49012200-49022400 Weak transcription Adipose Nuclei Adipose
45 chr13:49012400-49020000 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr13:49012400-49024400 Weak transcription Fetal Heart heart
47 chr13:49014600-49020400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr13:49015200-49027400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr13:49016600-49018400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr13:49016600-49020000 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015