The 2.0 version of rSNPBase

Variant report

Variant rs3092898
Chromosome Location chr13:49030236-49030237
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48990800-49030800 Weak transcription Ovary ovary
2 chr13:48991400-49030600 Weak transcription Spleen Spleen
3 chr13:49006800-49030400 Weak transcription Brain Cingulate Gyrus brain
4 chr13:49008800-49030800 Weak transcription Placenta Placenta
5 chr13:49009000-49030600 Weak transcription Gastric stomach
6 chr13:49009000-49030600 Weak transcription Lung lung
7 chr13:49017400-49062200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr13:49018000-49062400 Weak transcription Fetal Brain Male brain
9 chr13:49019000-49030600 Weak transcription Fetal Stomach stomach
10 chr13:49020800-49062000 Weak transcription Fetal Kidney kidney
11 chr13:49021200-49058600 Weak transcription Hela-S3 cervix
12 chr13:49021400-49030400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr13:49023600-49030400 Weak transcription Brain Anterior Caudate brain
14 chr13:49023600-49030400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr13:49023800-49030400 Weak transcription Brain Hippocampus Middle brain
16 chr13:49023800-49030600 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr13:49023800-49061000 Weak transcription Small Intestine intestine
18 chr13:49023800-49073800 Weak transcription NH-A brain
19 chr13:49024000-49030400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr13:49024000-49030400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr13:49024000-49030400 Weak transcription NHDF-Ad bronchial
22 chr13:49024000-49059000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr13:49025400-49030400 Weak transcription Liver Liver
24 chr13:49025400-49034400 Weak transcription Fetal Lung lung
25 chr13:49025600-49030400 Weak transcription Fetal Brain Female brain
26 chr13:49025600-49030600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr13:49025600-49030600 Weak transcription Brain Germinal Matrix brain
28 chr13:49025600-49030600 Weak transcription Fetal Intestine Small intestine
29 chr13:49025600-49030800 Weak transcription Rectal Smooth Muscle rectum
30 chr13:49025600-49041200 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr13:49025600-49056800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr13:49025600-49066200 Weak transcription Psoas Muscle Psoas
33 chr13:49025800-49030400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr13:49025800-49030400 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr13:49025800-49030600 Weak transcription Right Ventricle heart
36 chr13:49025800-49031000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr13:49026000-49030400 Weak transcription Brain Angular Gyrus brain
38 chr13:49026000-49030600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr13:49026000-49030600 Weak transcription Brain Inferior Temporal Lobe brain
40 chr13:49026000-49030800 Weak transcription Brain Substantia Nigra brain
41 chr13:49026200-49031600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:49026400-49033000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr13:49026600-49033000 Strong transcription HSMM muscle
44 chr13:49026600-49039400 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr13:49026800-49039400 Strong transcription Dnd41 blood
46 chr13:49026800-49039600 Strong transcription Primary B cells from peripheral blood blood
47 chr13:49027000-49031400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:49027000-49039800 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr13:49027200-49039200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr13:49027200-49039600 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015