The 2.0 version of rSNPBase

Variant report

Variant rs12584784
Chromosome Location chr13:48983912-48983913
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48916800-48985400 Weak transcription Colonic Mucosa Colon
2 chr13:48934600-48984200 Weak transcription Right Ventricle heart
3 chr13:48943600-48984200 Weak transcription Brain Angular Gyrus brain
4 chr13:48966400-48986000 Weak transcription Lung lung
5 chr13:48966800-48984200 Weak transcription Placenta Placenta
6 chr13:48968800-48984200 Weak transcription Stomach Smooth Muscle stomach
7 chr13:48969000-48984200 Weak transcription Fetal Intestine Large intestine
8 chr13:48969000-48984400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr13:48969200-48984200 Weak transcription Fetal Stomach stomach
10 chr13:48969200-48984400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:48970600-48984200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr13:48973800-48984000 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr13:48974600-48986000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr13:48975200-48984000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr13:48975200-48984200 Weak transcription Fetal Intestine Small intestine
16 chr13:48975200-48985400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr13:48975400-48984200 Weak transcription Duodenum Mucosa Duodenum
18 chr13:48975600-48984000 Weak transcription Stomach Mucosa stomach
19 chr13:48975600-48985200 Weak transcription NH-A brain
20 chr13:48975800-48984000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr13:48976000-48984200 Weak transcription Primary B cells from cord blood blood
22 chr13:48976000-48984200 Weak transcription A549 lung
23 chr13:48976000-48984200 Weak transcription NHLF lung
24 chr13:48976000-48984400 Weak transcription HSMMtube muscle
25 chr13:48976000-49005800 Weak transcription Hela-S3 cervix
26 chr13:48977000-48984000 Weak transcription Liver Liver
27 chr13:48977000-48984000 Weak transcription HUVEC blood vessel
28 chr13:48977600-48984000 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr13:48977600-48984200 Weak transcription Muscle Satellite Cultured Cells --
30 chr13:48977800-48984200 Weak transcription Fetal Lung lung
31 chr13:48977800-48984200 Weak transcription NHDF-Ad bronchial
32 chr13:48977800-48984400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr13:48977800-48984400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr13:48978000-48984000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:48978000-48984200 Weak transcription Osteobl bone
36 chr13:48978200-48984000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr13:48978400-48984000 Weak transcription Fetal Thymus thymus
38 chr13:48978400-48984200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr13:48978400-48984400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr13:48978400-48985200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr13:48978400-48985400 Weak transcription Fetal Muscle Trunk muscle
42 chr13:48978400-48986000 Weak transcription Esophagus oesophagus
43 chr13:48978400-48989800 Weak transcription Primary B cells from peripheral blood blood
44 chr13:48978800-48990400 Weak transcription Spleen Spleen
45 chr13:48979000-48984200 Weak transcription Primary hematopoietic stem cells blood
46 chr13:48979600-48984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr13:48980000-48984000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr13:48980200-48984200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr13:48981000-48984000 Weak transcription NHEK skin
50 chr13:48981000-48984200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015