Variant report

Variant rs57490980
Chromosome Location chr17:18160753-18160754
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:18159000-18162400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
2 chr17:18159200-18160800 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr17:18159200-18160800 Weak transcription Fetal Kidney kidney
4 chr17:18159200-18161000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
5 chr17:18159200-18162000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
6 chr17:18159800-18160800 Enhancers Fetal Heart heart
7 chr17:18159800-18161000 Enhancers Small Intestine intestine
8 chr17:18160000-18160800 Enhancers Primary B cells from peripheral blood blood
9 chr17:18160000-18160800 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr17:18160000-18160800 Enhancers Left Ventricle heart
11 chr17:18160000-18160800 Genic enhancers Sigmoid Colon Sigmoid Colon
12 chr17:18160000-18161200 Enhancers Fetal Brain Male brain
13 chr17:18160000-18161200 Flanking Active TSS HMEC breast
14 chr17:18160000-18161400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
15 chr17:18160200-18160800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
16 chr17:18160200-18160800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
17 chr17:18160200-18160800 Weak transcription Aorta Aorta
18 chr17:18160200-18160800 Enhancers Ovary ovary
19 chr17:18160200-18160800 Flanking Active TSS HepG2 liver
20 chr17:18160200-18161000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
21 chr17:18160200-18161000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr17:18160200-18161000 Flanking Active TSS Pancreas Pancrea
23 chr17:18160200-18161000 Flanking Active TSS Hela-S3 cervix
24 chr17:18160200-18161000 Flanking Active TSS HSMM muscle
25 chr17:18160200-18161200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr17:18160200-18161200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
27 chr17:18160200-18161200 Flanking Active TSS Esophagus oesophagus
28 chr17:18160200-18161400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
29 chr17:18160200-18161400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr17:18160200-18161400 Flanking Active TSS Colonic Mucosa Colon
31 chr17:18160200-18161400 Flanking Active TSS Duodenum Mucosa Duodenum
32 chr17:18160200-18161400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
33 chr17:18160200-18161600 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr17:18160200-18162400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
35 chr17:18160400-18160800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr17:18160400-18160800 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr17:18160400-18160800 Transcr. at gene 5' and 3' Fetal Brain Female brain
38 chr17:18160400-18160800 Transcr. at gene 5' and 3' Fetal Stomach stomach
39 chr17:18160400-18160800 Flanking Active TSS NHDF-Ad bronchial
40 chr17:18160400-18161000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr17:18160400-18161000 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr17:18160400-18161000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr17:18160400-18161000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
44 chr17:18160400-18161000 Flanking Active TSS Gastric stomach
45 chr17:18160400-18161000 Flanking Active TSS Rectal Smooth Muscle rectum
46 chr17:18160400-18161000 Flanking Active TSS NHLF lung
47 chr17:18160400-18161200 Flanking Active TSS H1 Cell Line embryonic stem cell
48 chr17:18160400-18161200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr17:18160400-18161200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr17:18160400-18161200 Flanking Active TSS Colon Smooth Muscle Colon

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