Variant report

Variant rs16961153
Chromosome Location chr17:18227101-18227102
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:18219400-18227200 Genic enhancers Primary T cells fromperipheralblood blood
2 chr17:18219400-18266000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr17:18220200-18228000 Weak transcription Fetal Kidney kidney
4 chr17:18220400-18228000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr17:18222400-18227200 Weak transcription HUVEC blood vessel
6 chr17:18222400-18266200 Weak transcription Small Intestine intestine
7 chr17:18222600-18227200 Weak transcription Psoas Muscle Psoas
8 chr17:18222600-18240800 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr17:18222600-18243200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr17:18222800-18236800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr17:18223000-18228200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr17:18223400-18228400 Strong transcription Primary B cells from cord blood blood
13 chr17:18223400-18235400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr17:18223600-18240800 Strong transcription Fetal Muscle Leg muscle
15 chr17:18223600-18265400 Strong transcription Fetal Stomach stomach
16 chr17:18223800-18227400 Weak transcription NH-A brain
17 chr17:18223800-18229200 Strong transcription NHEK skin
18 chr17:18223800-18236800 Strong transcription Primary T cells from cord blood blood
19 chr17:18223800-18236800 Strong transcription Lung lung
20 chr17:18223800-18240800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr17:18223800-18253600 Strong transcription Thymus Thymus
22 chr17:18224000-18231000 Strong transcription Primary T helper naive cells from peripheral blood blood
23 chr17:18224000-18236600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr17:18224000-18236600 Strong transcription Fetal Intestine Large intestine
25 chr17:18224000-18236800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr17:18224000-18240800 Strong transcription Dnd41 blood
27 chr17:18224200-18227400 Weak transcription Fetal Brain Male brain
28 chr17:18224200-18227600 Strong transcription Primary monocytes fromperipheralblood blood
29 chr17:18224200-18228000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
30 chr17:18224200-18228200 Strong transcription Fetal Intestine Small intestine
31 chr17:18224200-18229400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr17:18224200-18230200 Strong transcription Brain Anterior Caudate brain
33 chr17:18224200-18234600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr17:18224200-18235600 Strong transcription Esophagus oesophagus
35 chr17:18224200-18236200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr17:18224200-18236400 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr17:18224200-18236600 Strong transcription Rectal Smooth Muscle rectum
38 chr17:18224200-18236600 Strong transcription Sigmoid Colon Sigmoid Colon
39 chr17:18224200-18240800 Strong transcription Fetal Muscle Trunk muscle
40 chr17:18224200-18253000 Weak transcription Fetal Heart heart
41 chr17:18224400-18227800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr17:18224400-18249400 Weak transcription K562 blood
43 chr17:18224600-18227200 Weak transcription Right Atrium heart
44 chr17:18224600-18228000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr17:18224600-18236400 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr17:18224800-18228400 Strong transcription Primary B cells from peripheral blood blood
47 chr17:18224800-18229000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr17:18224800-18229600 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr17:18224800-18236600 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr17:18224800-18236800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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