Variant report

Variant rs12600694
Chromosome Location chr17:18091019-18091020
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:18087800-18091200 Flanking Active TSS Adipose Nuclei Adipose
2 chr17:18087800-18092000 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
3 chr17:18087800-18092200 Transcr. at gene 5' and 3' Dnd41 blood
4 chr17:18088000-18091200 Transcr. at gene 5' and 3' Fetal Stomach stomach
5 chr17:18088000-18091800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
6 chr17:18088000-18092000 Flanking Active TSS HUVEC blood vessel
7 chr17:18088000-18093000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
8 chr17:18088200-18091200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
9 chr17:18088200-18091200 Flanking Active TSS Fetal Brain Male brain
10 chr17:18088200-18091400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr17:18088200-18091400 Transcr. at gene 5' and 3' Thymus Thymus
12 chr17:18088200-18092000 Flanking Active TSS Brain Germinal Matrix brain
13 chr17:18088200-18092000 Flanking Active TSS NH-A brain
14 chr17:18088400-18091200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
15 chr17:18088800-18091200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
16 chr17:18088800-18091200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr17:18088800-18091200 Transcr. at gene 5' and 3' A549 lung
18 chr17:18088800-18091400 Flanking Active TSS Brain Anterior Caudate brain
19 chr17:18088800-18091400 Flanking Active TSS Psoas Muscle Psoas
20 chr17:18088800-18092000 Flanking Active TSS Brain Hippocampus Middle brain
21 chr17:18088800-18092000 Transcr. at gene 5' and 3' NHEK skin
22 chr17:18088800-18092200 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr17:18088800-18092200 Flanking Active TSS Osteobl bone
24 chr17:18089000-18091200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
25 chr17:18089000-18091200 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
26 chr17:18089000-18091200 Flanking Active TSS Fetal Heart heart
27 chr17:18089000-18091400 Enhancers Primary neutrophils fromperipheralblood blood
28 chr17:18089000-18091600 Transcr. at gene 5' and 3' K562 blood
29 chr17:18089000-18091800 Flanking Active TSS Colon Smooth Muscle Colon
30 chr17:18089000-18091800 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
31 chr17:18089000-18092000 Flanking Active TSS Brain Angular Gyrus brain
32 chr17:18089000-18092000 Flanking Active TSS Rectal Smooth Muscle rectum
33 chr17:18089000-18095400 Enhancers Small Intestine intestine
34 chr17:18089200-18091200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr17:18089200-18091200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr17:18089200-18091600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
37 chr17:18089200-18092000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr17:18089200-18092000 Flanking Active TSS Brain Cingulate Gyrus brain
39 chr17:18089200-18092000 Flanking Active TSS NHDF-Ad bronchial
40 chr17:18089200-18092200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr17:18089200-18092200 Genic enhancers Primary monocytes fromperipheralblood blood
42 chr17:18089400-18091200 Transcr. at gene 5' and 3' Left Ventricle heart
43 chr17:18089400-18091400 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
44 chr17:18089400-18091400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr17:18089400-18092000 Flanking Active TSS Colonic Mucosa Colon
46 chr17:18089400-18092000 Flanking Active TSS HMEC breast
47 chr17:18089400-18092200 Transcr. at gene 5' and 3' GM12878-XiMat blood
48 chr17:18089600-18091200 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
49 chr17:18089600-18091400 Flanking Active TSS HSMMtube muscle
50 chr17:18089600-18092000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain

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