Variant report

Variant	rs11078411
Chromosome Location	chr17:18088094-18088095
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F6	chr17:18087642-18088391	A549	lung:	n/a	n/a
2	POLR2A	chr17:18087693-18088366	GM12878	blood:	n/a	n/a
3	HA-E2F1	chr17:18086233-18088252	Hela-S3	cervix:	n/a	chr17:18087045-18087054 chr17:18087051-18087060 chr17:18086531-18086539 chr17:18087129-18087138 chr17:18086353-18086362 chr17:18086408-18086418 chr17:18086531-18086539 chr17:18086411-18086421 chr17:18086947-18086956 chr17:18086777-18086788 chr17:18087297-18087307 chr17:18086420-18086430 chr17:18086527-18086541 chr17:18087515-18087524 chr17:18086781-18086788
4	CHD1	chr17:18085856-18091134	IMR90	lung:	n/a	n/a
5	CCNT2	chr17:18086198-18088353	K562	blood:	n/a	chr17:18087009-18087018
6	MAX	chr17:18085562-18088680	NB4	blood:	n/a	chr17:18086307-18086316 chr17:18086746-18086755 chr17:18087462-18087472
7	TBL1XR1	chr17:18087952-18088240	K562	blood:	n/a	n/a
8	MXI1	chr17:18085581-18092228	SK-N-SH	brain:	n/a	chr17:18086672-18086687 chr17:18088362-18088377
9	MXI1	chr17:18088090-18088499	K562	blood:	n/a	chr17:18088362-18088377
10	MAZ	chr17:18085859-18088356	K562	blood:	n/a	chr17:18086307-18086316 chr17:18086746-18086755 chr17:18087462-18087472
11	POLR2A	chr17:18087692-18088421	K562	blood:	n/a	n/a
12	SIN3AK20	chr17:18087842-18088434	K562	blood:	n/a	n/a
13	ZMIZ1	chr17:18088003-18088382	K562	blood:	n/a	n/a
14	CTCF	chr17:18088080-18088230	GM12864	blood:	n/a	n/a
15	POLR2A	chr17:18086154-18088445	K562	blood:	n/a	n/a
16	ELF1	chr17:18087801-18088427	GM12878	blood:	n/a	n/a
17	POLR2A	chr17:18088049-18088221	H1-hESC	embryonic stem cell:	n/a	n/a
18	RCOR1	chr17:18085779-18088357	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr17:18085877-18088391	MCF-7	breast:	n/a	n/a
20	SIN3AK20	chr17:18085861-18088471	MCF-7	breast:	n/a	n/a
21	STAT1	chr17:18087827-18088321	GM12878	blood:	n/a	n/a
22	TBL1XR1	chr17:18088022-18088509	K562	blood:	n/a	n/a
23	YY1	chr17:18088031-18088429	GM12878	blood:	n/a	n/a
24	POLR2A	chr17:18087498-18088352	A549	lung:	n/a	n/a
25	MXI1	chr17:18087719-18088344	H1-hESC	embryonic stem cell:	n/a	n/a
26	BRCA1	chr17:18087921-18089168	Hela-S3	cervix:	n/a	chr17:18088984-18088991
27	CREB1	chr17:18087820-18088412	K562	blood:	n/a	n/a
28	REST	chr17:18086047-18088243	H1-neurons	neurons:	n/a	chr17:18086321-18086335 chr17:18086636-18086649 chr17:18086636-18086649 chr17:18086498-18086508
29	CHD2	chr17:18086153-18088514	Hela-S3	cervix:	n/a	n/a
30	MAX	chr17:18087614-18088425	K562	blood:	n/a	n/a
31	MAZ	chr17:18085721-18089121	IMR90	lung:	n/a	chr17:18086307-18086316 chr17:18086746-18086755 chr17:18087462-18087472
32	POLR2A	chr17:18086134-18088479	Hela-S3	cervix:	n/a	n/a
33	MYBL2	chr17:18087991-18088340	HepG2	liver:	n/a	n/a
34	POLR2A	chr17:18086097-18088327	GM18526	blood:	n/a	n/a
35	ZNF384	chr17:18088039-18088334	K562	blood:	n/a	n/a
36	POLR2A	chr17:18085606-18088111	GM12878	blood:	n/a	n/a
37	POLR2A	chr17:18087495-18088344	GM12878	blood:	n/a	n/a
38	RAD21	chr17:18088042-18088336	GM12878	blood:	n/a	n/a
39	MAX	chr17:18086049-18088363	Hela-S3	cervix:	n/a	chr17:18086307-18086316 chr17:18086746-18086755 chr17:18087462-18087472
40	EP300	chr17:18087589-18092262	SK-N-SH	brain:	n/a	chr17:18089998-18090012
41	E2F6	chr17:18087719-18088410	K562	blood:	n/a	n/a
42	WRNIP1	chr17:18087774-18091201	GM12878	blood:	n/a	n/a
43	HCFC1	chr17:18085487-18088855	Hela-S3	cervix:	n/a	n/a
44	USF2	chr17:18087759-18088577	Hela-S3	cervix:	n/a	n/a
45	USF2	chr17:18087921-18088230	HepG2	liver:	n/a	n/a
46	CTCF	chr17:18088001-18088425	GM12878	blood:	n/a	n/a
47	RFX5	chr17:18087960-18088424	Hela-S3	cervix:	n/a	n/a
48	CREB1	chr17:18086048-18088441	A549	lung:	n/a	n/a
49	MTA3	chr17:18085372-18088527	GM12878	blood:	n/a	n/a
50	CTCF	chr17:18088084-18088322	GM12891	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:18086297..18088229-chr17:18161732..18163616,2	MCF-7	breast:
2	chr17:18057350..18061680-chr17:18083813..18088656,8	K562	blood:
3	chr17:18057503..18062681-chr17:18084968..18089396,8	MCF-7	breast:
4	chr17:18085197..18089449-chr17:18160313..18164902,6	K562	blood:
5	chr17:18059406..18063498-chr17:18086302..18089651,4	K562	blood:
6	chr17:18061742..18067292-chr17:18083221..18089651,7	K562	blood:
7	chr17:18086032..18088176-chr17:18160313..18162937,3	K562	blood:

Variant related genes	Relation type
ENSG00000266677	TF binding region
ENSG00000177427	Chromatin interaction
ENSG00000091536	Chromatin interaction
ENSG00000177731	Chromatin interaction

Extended variants
information (count: 91 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:79)

rs_ID	r²[population]
rs10048161	0.94[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10451244	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11078412	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11652964	1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11653988	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11654146	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11654177	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11654741	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11655588	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11655731	1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11655797	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11656035	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11657194	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11658477	0.94[CEU][hapmap];1.00[CHB][hapmap];0.87[GIH][hapmap];0.92[MEX][hapmap];0.90[TSI][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11868832	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11868886	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11869582	0.80[CEU][hapmap]
rs11871039	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11871491	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12449313	0.94[GIH][hapmap]
rs12600694	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[GIH][hapmap];0.87[LWK][hapmap];0.93[MEX][hapmap];0.88[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13284	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[GIH][hapmap];0.95[LWK][hapmap];0.80[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1563371	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1563373	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16960980	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16960983	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16960986	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16960990	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16960996	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16961153	0.94[GIH][hapmap]
rs2015336	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.92[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2071242	0.90[GIH][hapmap]
rs2290502	0.90[GIH][hapmap]
rs2290503	0.90[GIH][hapmap]
rs2294913	0.94[GIH][hapmap]
rs28364628	0.90[GIH][hapmap]
rs28811342	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3088233	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34474249	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs36058389	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3817992	0.94[GIH][hapmap]
rs3829956	0.94[GIH][hapmap]
rs55918833	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58441148	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59354912	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs60285171	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62072464	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62072465	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62072466	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62072467	0.90[EUR][1000 genomes]
rs62072468	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62072496	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62072497	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62072498	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62072500	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62073602	0.90[EUR][1000 genomes]
rs62073603	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62073604	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62073605	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62073606	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62073607	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62073608	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62073609	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62073611	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62073615	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62073649	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62073650	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6502640	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7207276	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7215678	0.90[GIH][hapmap]
rs735960	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7498	0.90[GIH][hapmap]
rs8065026	0.88[CEU][hapmap];1.00[CHB][hapmap];0.87[GIH][hapmap];0.93[MEX][hapmap];0.90[TSI][hapmap];0.90[EUR][1000 genomes]
rs8069094	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8077577	0.88[CEU][hapmap];1.00[GIH][hapmap];0.92[MEX][hapmap];0.85[MKK][hapmap];0.87[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9909104	1.00[GIH][hapmap]
rs9913139	0.90[GIH][hapmap]
rs9916193	0.90[EUR][1000 genomes]
rs997315	0.94[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531183	chr17:17571035-18205309	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
2	nsv916653	chr17:17651916-18454952	Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
3	nsv533142	chr17:17691726-18236686	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
4	nsv482491	chr17:17959577-18153920	Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
5	nsv1061162	chr17:17978838-18259234	Flanking Active TSS Weak transcription Genic enhancers Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
6	nsv492305	chr17:17980441-18424702	Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
7	nsv907770	chr17:18003845-18098018	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
8	nsv907771	chr17:18013560-18098018	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
9	nsv907772	chr17:18030524-18098018	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
10	nsv510702	chr17:18037676-18116801	Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
11	esv3411665	chr17:18085527-18089325	Flanking Active TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
12	esv3376987	chr17:18086452-18089000	Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs11078411	SHMT1	cis	lymphoblastoid	seeQTL
rs11078411	FLII	cis	cerebellum	SCAN
rs11078411	PLD6	cis	cerebellum	SCAN
rs11078411	LOC162632	cis	cerebellum	SCAN
rs11078411	SHMT1	cis	cerebellum	SCAN
rs11078411	EPN2	cis	parietal	SCAN
rs11078411	LOC162632	cis	parietal	SCAN
rs11078411	SLC47A1	cis	cerebellum	SCAN
rs11078411	TRPV2	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:18085600-18088600	Active TSS	iPS-20b Cell Line	embryonic stem cell
2	chr17:18085600-18088800	Active TSS	H9 Cell Line	embryonic stem cell
3	chr17:18085600-18088800	Active TSS	HUES64 Cell Line	embryonic stem cell
4	chr17:18085600-18089000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr17:18085600-18090600	Active TSS	Aorta	Aorta
6	chr17:18085800-18088200	Active TSS	iPS-15b Cell Line	embryonic stem cell
7	chr17:18085800-18088400	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr17:18085800-18088800	Active TSS	Fetal Kidney	kidney
9	chr17:18085800-18088800	Active TSS	Psoas Muscle	Psoas
10	chr17:18085800-18089000	Active TSS	ES-I3 Cell Line	embryonic stem cell
11	chr17:18085800-18089000	Active TSS	Small Intestine	intestine
12	chr17:18085800-18089200	Active TSS	HUES6 Cell Line	embryonic stem cell
13	chr17:18085800-18089400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr17:18085800-18090200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
15	chr17:18085800-18090600	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr17:18086000-18088200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr17:18086000-18088200	Active TSS	Primary T cells from cord blood	blood
18	chr17:18086000-18088200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
19	chr17:18086000-18088200	Active TSS	Muscle Satellite Cultured Cells	--
20	chr17:18086000-18088200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr17:18086000-18088200	Active TSS	Brain Cingulate Gyrus	brain
22	chr17:18086000-18088200	Active TSS	Brain Inferior Temporal Lobe	brain
23	chr17:18086000-18088200	Active TSS	Brain Substantia Nigra	brain
24	chr17:18086000-18088200	Active TSS	Fetal Intestine Large	intestine
25	chr17:18086000-18088200	Active TSS	Fetal Lung	lung
26	chr17:18086000-18088200	Active TSS	Thymus	Thymus
27	chr17:18086000-18088200	Active TSS	HSMMtube	muscle
28	chr17:18086000-18088200	Active TSS	K562	blood
29	chr17:18086000-18088200	Active TSS	NH-A	brain
30	chr17:18086000-18088200	Active TSS	NHEK	skin
31	chr17:18086000-18088400	Active TSS	Primary T helper naive cells from peripheral blood	blood
32	chr17:18086000-18088400	Active TSS	Primary T killer memory cells from peripheral blood	blood
33	chr17:18086000-18088400	Active TSS	Stomach Smooth Muscle	stomach
34	chr17:18086000-18088600	Active TSS	Sigmoid Colon	Sigmoid Colon
35	chr17:18086000-18088800	Active TSS	iPS-18 Cell Line	embryonic stem cell
36	chr17:18086000-18088800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
37	chr17:18086000-18088800	Active TSS	Brain Anterior Caudate	brain
38	chr17:18086000-18088800	Active TSS	A549	lung
39	chr17:18086000-18088800	Active TSS	Osteobl	bone
40	chr17:18086000-18089000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr17:18086000-18089000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr17:18086000-18089000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr17:18086000-18089000	Active TSS	Brain Angular Gyrus	brain
44	chr17:18086000-18089000	Active TSS	Colon Smooth Muscle	Colon
45	chr17:18086000-18089000	Active TSS	Duodenum Smooth Muscle	Duodenum
46	chr17:18086000-18089000	Active TSS	Left Ventricle	heart
47	chr17:18086000-18089000	Active TSS	Lung	lung
48	chr17:18086000-18089000	Active TSS	Rectal Smooth Muscle	rectum
49	chr17:18086000-18089000	Active TSS	Hela-S3	cervix
50	chr17:18086000-18089000	Active TSS	HSMM	muscle

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