Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs13263644	0.92[EUR][1000 genomes]
rs13266278	0.94[EUR][1000 genomes]
rs13268550	0.94[EUR][1000 genomes]
rs13268860	0.94[EUR][1000 genomes]
rs13268876	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13275630	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16935249	0.94[ASN][1000 genomes]
rs34054971	0.94[EUR][1000 genomes]
rs34176595	0.94[ASN][1000 genomes]
rs34261076	0.94[EUR][1000 genomes]
rs34781970	0.88[ASN][1000 genomes]
rs4263778	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5009753	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5009754	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998830	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs71554633	0.89[EUR][1000 genomes]
rs73683770	0.82[ASN][1000 genomes]
rs73683771	0.88[ASN][1000 genomes]
rs73683772	0.88[ASN][1000 genomes]
rs73683773	0.82[ASN][1000 genomes]
rs7460431	0.90[EUR][1000 genomes]
rs7463208	0.94[EUR][1000 genomes]
rs7464189	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7464277	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv33049	chr8:69836813-69943360	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69851000-69853200	Enhancers	HSMM	muscle
2	chr8:69852000-69853200	Enhancers	HMEC	breast
3	chr8:69852200-69853200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chr8:69852400-69853200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:69852800-69853200	Enhancers	HSMMtube	muscle

Quick Search: