The 2.0 version of rSNPBase

Variant report

Variant rs57519584
Chromosome Location chr17:46113006-46113007
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46104200-46113800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr17:46104400-46114000 Weak transcription Liver Liver
3 chr17:46104400-46114000 Weak transcription Right Ventricle heart
4 chr17:46104400-46114200 Weak transcription Brain Substantia Nigra brain
5 chr17:46104600-46113800 Weak transcription HSMM muscle
6 chr17:46104600-46114000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr17:46104600-46114000 Weak transcription Brain Hippocampus Middle brain
8 chr17:46104800-46113800 Weak transcription NHDF-Ad bronchial
9 chr17:46104800-46114000 Weak transcription HSMMtube muscle
10 chr17:46105000-46113800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr17:46105400-46114000 Weak transcription K562 blood
12 chr17:46105600-46114000 Weak transcription Pancreas Pancrea
13 chr17:46108200-46113200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr17:46108400-46113800 Weak transcription Muscle Satellite Cultured Cells --
15 chr17:46108400-46114000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr17:46108400-46114000 Weak transcription Adipose Nuclei Adipose
17 chr17:46108400-46114000 Weak transcription NH-A brain
18 chr17:46108400-46114200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr17:46108400-46114200 Weak transcription Brain Anterior Caudate brain
20 chr17:46108400-46114200 Weak transcription Brain Cingulate Gyrus brain
21 chr17:46108400-46114200 Weak transcription Esophagus oesophagus
22 chr17:46108600-46113800 Weak transcription Colon Smooth Muscle Colon
23 chr17:46110400-46114000 Weak transcription Ovary ovary
24 chr17:46110400-46114000 Weak transcription Placenta Amnion Placenta Amnion
25 chr17:46111200-46113800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr17:46111200-46113800 Weak transcription Stomach Smooth Muscle stomach
27 chr17:46111200-46114000 Weak transcription Fetal Stomach stomach
28 chr17:46111200-46114200 Weak transcription Aorta Aorta
29 chr17:46111400-46113600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr17:46111400-46113800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr17:46111400-46113800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr17:46111400-46113800 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr17:46111400-46113800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr17:46111400-46113800 Weak transcription NHLF lung
35 chr17:46111400-46114000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr17:46111400-46114000 Weak transcription Placenta Placenta
37 chr17:46111400-46114200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr17:46111400-46114200 Weak transcription Spleen Spleen
39 chr17:46111600-46113400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr17:46111600-46113800 Weak transcription Fetal Muscle Leg muscle
41 chr17:46111800-46114000 Weak transcription Fetal Muscle Trunk muscle
42 chr17:46112600-46113600 Weak transcription Osteobl bone
43 chr17:46112600-46113800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr17:46112600-46113800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015