Variant report
| Variant | rs5753371 |
|---|---|
| Chromosome Location | chr22:31282120-31282121 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:31265200-31299400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr22:31266400-31295200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr22:31269400-31284200 | Weak transcription | NHEK | skin |
| 4 | chr22:31269800-31283400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr22:31274200-31308400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr22:31275200-31284200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 7 | chr22:31275600-31283400 | Weak transcription | Brain Germinal Matrix | brain |
| 8 | chr22:31275800-31283600 | Weak transcription | HSMM | muscle |
| 9 | chr22:31275800-31284800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 10 | chr22:31275800-31285000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 11 | chr22:31275800-31289400 | Weak transcription | NHDF-Ad | bronchial |
| 12 | chr22:31276400-31283400 | Weak transcription | Fetal Brain Female | brain |
| 13 | chr22:31276400-31283600 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr22:31277800-31295200 | Weak transcription | Fetal Brain Male | brain |
| 15 | chr22:31278000-31283400 | Weak transcription | Brain Hippocampus Middle | brain |
| 16 | chr22:31278000-31290000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 17 | chr22:31278200-31283200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 18 | chr22:31278200-31283400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 19 | chr22:31278200-31284400 | Weak transcription | Gastric | stomach |
| 20 | chr22:31278200-31285200 | Weak transcription | Esophagus | oesophagus |
| 21 | chr22:31278200-31286600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 22 | chr22:31278200-31288200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 23 | chr22:31278400-31283400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr22:31278400-31283400 | Weak transcription | Fetal Stomach | stomach |
| 25 | chr22:31278400-31283600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr22:31278400-31283600 | Weak transcription | Pancreas | Pancrea |
| 27 | chr22:31278400-31286200 | Weak transcription | Fetal Muscle Leg | muscle |
| 28 | chr22:31278400-31288600 | Weak transcription | HSMMtube | muscle |
| 29 | chr22:31278400-31291800 | Weak transcription | HMEC | breast |
| 30 | chr22:31278400-31292600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 31 | chr22:31278400-31301600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr22:31278600-31285600 | Weak transcription | Liver | Liver |
| 33 | chr22:31278600-31321400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr22:31278800-31295000 | Weak transcription | Small Intestine | intestine |
| 35 | chr22:31278800-31301600 | Weak transcription | A549 | lung |
| 36 | chr22:31279400-31283600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr22:31279400-31288600 | Weak transcription | Hela-S3 | cervix |
| 38 | chr22:31279600-31283600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 39 | chr22:31279600-31285600 | Weak transcription | HepG2 | liver |
| 40 | chr22:31280000-31283400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 41 | chr22:31280000-31285000 | Weak transcription | Right Ventricle | heart |
| 42 | chr22:31280000-31285200 | Weak transcription | Left Ventricle | heart |
| 43 | chr22:31280200-31287200 | Genic enhancers | Fetal Intestine Small | intestine |
| 44 | chr22:31280200-31288200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 45 | chr22:31280600-31282200 | Weak transcription | Fetal Heart | heart |
| 46 | chr22:31280600-31284600 | Weak transcription | Fetal Lung | lung |
| 47 | chr22:31281000-31283400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 48 | chr22:31281200-31283200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 49 | chr22:31281200-31283400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 50 | chr22:31281400-31288800 | Weak transcription | Lung | lung |
