Variant report
| Variant | rs62238091 |
|---|---|
| Chromosome Location | chr22:31290543-31290544 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:31265200-31299400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr22:31266400-31295200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr22:31274200-31308400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 4 | chr22:31277800-31295200 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr22:31278400-31291800 | Weak transcription | HMEC | breast |
| 6 | chr22:31278400-31292600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 7 | chr22:31278400-31301600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr22:31278600-31321400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr22:31278800-31295000 | Weak transcription | Small Intestine | intestine |
| 10 | chr22:31278800-31301600 | Weak transcription | A549 | lung |
| 11 | chr22:31282200-31294400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr22:31282800-31294200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr22:31283000-31290600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 14 | chr22:31283000-31306600 | Weak transcription | Fetal Heart | heart |
| 15 | chr22:31283400-31290600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 16 | chr22:31283400-31290800 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr22:31283400-31291000 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 18 | chr22:31283400-31291200 | Strong transcription | Brain Cingulate Gyrus | brain |
| 19 | chr22:31283400-31291200 | Strong transcription | Brain Hippocampus Middle | brain |
| 20 | chr22:31283400-31291400 | Strong transcription | Brain Germinal Matrix | brain |
| 21 | chr22:31283400-31291400 | Strong transcription | Fetal Brain Female | brain |
| 22 | chr22:31283400-31291600 | Strong transcription | Brain Anterior Caudate | brain |
| 23 | chr22:31283400-31304000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 24 | chr22:31283600-31291000 | Weak transcription | NHLF | lung |
| 25 | chr22:31283600-31291200 | Strong transcription | Brain Substantia Nigra | brain |
| 26 | chr22:31283600-31292800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 27 | chr22:31283600-31318400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 28 | chr22:31284200-31290600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr22:31284200-31291800 | Strong transcription | NHEK | skin |
| 30 | chr22:31284400-31308400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 31 | chr22:31284600-31293000 | Strong transcription | Fetal Lung | lung |
| 32 | chr22:31284600-31295200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr22:31284800-31306600 | Weak transcription | Colonic Mucosa | Colon |
| 34 | chr22:31285000-31290600 | Strong transcription | Right Ventricle | heart |
| 35 | chr22:31285200-31291200 | Strong transcription | Brain Angular Gyrus | brain |
| 36 | chr22:31285200-31295000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 37 | chr22:31286200-31294000 | Weak transcription | HepG2 | liver |
| 38 | chr22:31286200-31294200 | Weak transcription | Aorta | Aorta |
| 39 | chr22:31286400-31294400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr22:31286400-31299200 | Weak transcription | Liver | Liver |
| 41 | chr22:31286400-31304000 | Weak transcription | Ovary | ovary |
| 42 | chr22:31286800-31291200 | Weak transcription | Adipose Nuclei | Adipose |
| 43 | chr22:31287000-31291000 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 44 | chr22:31287200-31291600 | Strong transcription | Fetal Intestine Large | intestine |
| 45 | chr22:31287200-31294200 | Strong transcription | Fetal Intestine Small | intestine |
| 46 | chr22:31287200-31299200 | Weak transcription | Esophagus | oesophagus |
| 47 | chr22:31287400-31300400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 48 | chr22:31287800-31295000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 49 | chr22:31288200-31290600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 50 | chr22:31288200-31291200 | Strong transcription | K562 | blood |
