Variant report

Variant rs5753485
Chromosome Location chr22:31558158-31558159
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31555400-31558400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
2 chr22:31555600-31559400 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr22:31556400-31558400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr22:31556600-31558400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr22:31556600-31558600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr22:31556800-31558200 Flanking Active TSS Osteobl bone
7 chr22:31557000-31558200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr22:31557000-31558200 Enhancers Primary B cells from peripheral blood blood
9 chr22:31557000-31558200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr22:31557000-31558200 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr22:31557000-31558200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr22:31557000-31558200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
13 chr22:31557000-31558200 Flanking Active TSS HMEC breast
14 chr22:31557000-31558400 Enhancers Primary T cells fromperipheralblood blood
15 chr22:31557000-31558600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr22:31557000-31558800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr22:31557000-31558800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr22:31557000-31558800 Flanking Active TSS Liver Liver
19 chr22:31557000-31559200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr22:31557000-31569400 Weak transcription Placenta Amnion Placenta Amnion
21 chr22:31557000-31573000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr22:31557000-31575200 Weak transcription Esophagus oesophagus
23 chr22:31557200-31558200 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr22:31557200-31558200 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr22:31557200-31558200 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr22:31557200-31558200 Enhancers Stomach Mucosa stomach
27 chr22:31557200-31558200 Flanking Active TSS HSMMtube muscle
28 chr22:31557200-31558200 Flanking Active TSS NHEK skin
29 chr22:31557200-31558400 Enhancers Primary B cells from cord blood blood
30 chr22:31557200-31558400 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr22:31557200-31558400 Enhancers Fetal Heart heart
32 chr22:31557200-31558400 Enhancers Placenta Placenta
33 chr22:31557200-31558600 Enhancers Primary monocytes fromperipheralblood blood
34 chr22:31557200-31558600 Enhancers Primary neutrophils fromperipheralblood blood
35 chr22:31557200-31558600 Enhancers Primary mononuclear cells fromperipheralblood Blood
36 chr22:31557200-31558600 Enhancers Brain Substantia Nigra brain
37 chr22:31557200-31558800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr22:31557200-31558800 Enhancers Small Intestine intestine
39 chr22:31557200-31561400 Weak transcription Fetal Thymus thymus
40 chr22:31557200-31568800 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr22:31557200-31569400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr22:31557200-31591200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr22:31557400-31558200 Enhancers Primary T cells from cord blood blood
44 chr22:31557400-31558200 Enhancers Brain Anterior Caudate brain
45 chr22:31557400-31558200 Enhancers Fetal Lung lung
46 chr22:31557400-31558200 Enhancers Fetal Stomach stomach
47 chr22:31557400-31558200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr22:31557400-31558400 Weak transcription Fetal Kidney kidney
49 chr22:31557400-31558600 Enhancers Primary hematopoietic stem cells blood
50 chr22:31557400-31558600 Enhancers Primary T helper cells fromperipheralblood blood

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