The 2.0 version of rSNPBase

Variant report

Variant rs5753523
Chromosome Location chr22:31648356-31648357
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31641400-31649600 Weak transcription Hela-S3 cervix
2 chr22:31644200-31649800 Weak transcription H9 Cell Line embryonic stem cell
3 chr22:31644200-31665800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr22:31644600-31649800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr22:31644600-31650400 Weak transcription Primary B cells from peripheral blood blood
6 chr22:31644600-31654200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr22:31644600-31654200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr22:31644600-31654400 Weak transcription K562 blood
9 chr22:31644600-31658000 Weak transcription Psoas Muscle Psoas
10 chr22:31644600-31668600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr22:31644800-31649200 Weak transcription Primary T cells from cord blood blood
12 chr22:31644800-31649600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr22:31644800-31650000 Weak transcription H1 Cell Line embryonic stem cell
14 chr22:31644800-31650000 Weak transcription Primary monocytes fromperipheralblood blood
15 chr22:31644800-31650200 Genic enhancers HepG2 liver
16 chr22:31644800-31650800 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr22:31644800-31654400 Weak transcription Liver Liver
18 chr22:31644800-31654800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr22:31645000-31650000 Weak transcription Fetal Thymus thymus
20 chr22:31645000-31654200 Weak transcription Fetal Brain Female brain
21 chr22:31645000-31654400 Weak transcription Brain Germinal Matrix brain
22 chr22:31645000-31668400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr22:31645000-31668600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr22:31645000-31677600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr22:31645200-31654400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr22:31645200-31654800 Weak transcription Fetal Lung lung
27 chr22:31645200-31667000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr22:31645400-31650000 Weak transcription Colonic Mucosa Colon
29 chr22:31645400-31650000 Weak transcription Spleen Spleen
30 chr22:31645400-31654000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr22:31645400-31654000 Weak transcription Dnd41 blood
32 chr22:31645400-31654200 Weak transcription Brain Angular Gyrus brain
33 chr22:31645400-31661800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr22:31645600-31648800 Enhancers Duodenum Mucosa Duodenum
35 chr22:31645600-31654400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr22:31645600-31654600 Weak transcription Rectal Smooth Muscle rectum
37 chr22:31645800-31648400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr22:31645800-31648400 Enhancers Pancreas Pancrea
39 chr22:31645800-31649000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr22:31645800-31649800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr22:31645800-31650000 Weak transcription Fetal Heart heart
42 chr22:31645800-31650000 Weak transcription Thymus Thymus
43 chr22:31645800-31651400 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr22:31645800-31654000 Weak transcription Primary T cells fromperipheralblood blood
45 chr22:31645800-31654000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr22:31645800-31654200 Weak transcription Colon Smooth Muscle Colon
47 chr22:31645800-31654400 Weak transcription NHLF lung
48 chr22:31645800-31654600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr22:31645800-31654800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr22:31646000-31649800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015