Variant report

Variant	rs57536136
Chromosome Location	chr11:45161919-45161920
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11038320	1.00[AMR][1000 genomes]
rs11038322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11038326	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12275470	1.00[AMR][1000 genomes]
rs12275518	1.00[AMR][1000 genomes]
rs12275684	1.00[AMR][1000 genomes]
rs12280738	1.00[AMR][1000 genomes]
rs12296068	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60845464	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464554	1.00[AMR][1000 genomes]
rs73464561	1.00[AMR][1000 genomes]
rs73464565	1.00[AMR][1000 genomes]
rs73464579	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464580	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825852	chr11:45141386-45228580	Bivalent/Poised TSS Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv541025	chr11:45154352-45193352	Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45161800-45162200	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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