Variant report

Variant rs57650809
Chromosome Location chr6:15262185-15262186
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:15251200-15279400 Weak transcription A549 lung
2 chr6:15253200-15262200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
3 chr6:15253200-15269600 Enhancers Primary T helper cells fromperipheralblood blood
4 chr6:15253600-15262200 Enhancers Skeletal Muscle Female skeletal muscle
5 chr6:15254200-15269600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
6 chr6:15254600-15263200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:15254600-15264800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr6:15254800-15262800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:15254800-15264200 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr6:15254800-15269800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:15256000-15264600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:15256200-15262800 Weak transcription Spleen Spleen
13 chr6:15256200-15263800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:15256400-15263200 Weak transcription Esophagus oesophagus
15 chr6:15256400-15263400 Weak transcription Gastric stomach
16 chr6:15256400-15264200 Weak transcription HepG2 liver
17 chr6:15256400-15265400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr6:15256600-15262600 Genic enhancers HUES48 Cell Line embryonic stem cell
19 chr6:15256600-15263400 Enhancers Muscle Satellite Cultured Cells --
20 chr6:15257000-15265200 Weak transcription Liver Liver
21 chr6:15257000-15265200 Weak transcription Lung lung
22 chr6:15257000-15265200 Weak transcription Pancreas Pancrea
23 chr6:15257200-15263400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:15257800-15265200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:15257800-15270000 Enhancers Primary monocytes fromperipheralblood blood
26 chr6:15258000-15262600 Genic enhancers HUES6 Cell Line embryonic stem cell
27 chr6:15258000-15263000 Weak transcription Fetal Brain Female brain
28 chr6:15258200-15265200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr6:15258200-15268600 Enhancers NHDF-Ad bronchial
30 chr6:15258600-15263400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr6:15258800-15267000 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr6:15258800-15268800 Weak transcription Aorta Aorta
33 chr6:15258800-15270400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr6:15259000-15264200 Enhancers HUES64 Cell Line embryonic stem cell
35 chr6:15259200-15263200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:15259400-15264400 Weak transcription Fetal Kidney kidney
37 chr6:15259800-15262400 Weak transcription Primary B cells from cord blood blood
38 chr6:15259800-15263000 Weak transcription Right Ventricle heart
39 chr6:15259800-15264800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr6:15260000-15263000 Weak transcription Brain Germinal Matrix brain
41 chr6:15260000-15263000 Weak transcription Right Atrium heart
42 chr6:15260000-15263200 Weak transcription Left Ventricle heart
43 chr6:15260200-15262200 Weak transcription H1 Cell Line embryonic stem cell
44 chr6:15260400-15262400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr6:15260600-15264200 Weak transcription NHEK skin
46 chr6:15260800-15262800 Weak transcription Primary B cells from peripheral blood blood
47 chr6:15260800-15263000 Weak transcription Psoas Muscle Psoas
48 chr6:15260800-15263000 Weak transcription GM12878-XiMat blood
49 chr6:15260800-15263200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr6:15260800-15263400 Weak transcription Primary T regulatory cells fromperipheralblood blood

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