Variant report

Variant rs57725120
Chromosome Location chr1:172263175-172263176
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172256200-172267400 Weak transcription Left Ventricle heart
2 chr1:172256200-172267400 Weak transcription Psoas Muscle Psoas
3 chr1:172256200-172290000 Weak transcription Brain Hippocampus Middle brain
4 chr1:172256400-172290200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:172256600-172265200 Weak transcription NH-A brain
6 chr1:172256600-172289800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr1:172257600-172267400 Weak transcription Pancreas Pancrea
8 chr1:172260600-172271000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:172261800-172263400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:172261800-172264000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:172262000-172263200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:172262000-172263200 Enhancers Ovary ovary
13 chr1:172262000-172263400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:172262000-172263800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:172262200-172263200 Enhancers Adipose Nuclei Adipose
16 chr1:172262600-172263200 Enhancers Fetal Muscle Leg muscle
17 chr1:172263000-172267400 Weak transcription Fetal Intestine Small intestine

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