The 2.0 version of rSNPBase

Variant report

Variant rs57778143
Chromosome Location chr5:126173656-126173657
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126136000-126175200 Strong transcription Dnd41 blood
2 chr5:126139800-126175400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:126140000-126175200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:126140000-126175400 Strong transcription Fetal Thymus thymus
5 chr5:126141000-126177400 Weak transcription Small Intestine intestine
6 chr5:126141200-126181800 Weak transcription Rectal Smooth Muscle rectum
7 chr5:126141400-126174200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr5:126146000-126183200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr5:126146000-126183600 Weak transcription Left Ventricle heart
10 chr5:126148200-126182400 Weak transcription HSMMtube muscle
11 chr5:126148200-126193200 Weak transcription Brain Angular Gyrus brain
12 chr5:126149600-126181400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr5:126151200-126175200 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr5:126151200-126175400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr5:126151400-126181400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr5:126151800-126175200 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr5:126152200-126173800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr5:126152200-126175200 Strong transcription Primary monocytes fromperipheralblood blood
19 chr5:126153600-126175400 Strong transcription Primary neutrophils fromperipheralblood blood
20 chr5:126158000-126204600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr5:126162600-126181200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr5:126162800-126176000 Weak transcription Fetal Heart heart
23 chr5:126162800-126182000 Weak transcription Brain Anterior Caudate brain
24 chr5:126163000-126181600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr5:126163200-126181200 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr5:126163600-126181200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr5:126163600-126181200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr5:126163800-126174000 Weak transcription Pancreas Pancrea
29 chr5:126163800-126176200 Weak transcription Ovary ovary
30 chr5:126163800-126182200 Weak transcription Colonic Mucosa Colon
31 chr5:126163800-126182600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:126163800-126193200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr5:126164000-126182400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr5:126165600-126181400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:126166000-126177000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr5:126166000-126181200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr5:126167200-126181200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr5:126167400-126175200 Weak transcription NHEK skin
39 chr5:126169600-126181400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr5:126169600-126182600 Weak transcription Placenta Placenta
41 chr5:126169800-126175800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr5:126169800-126180600 Weak transcription Duodenum Mucosa Duodenum
43 chr5:126169800-126181400 Weak transcription Fetal Kidney kidney
44 chr5:126169800-126181400 Weak transcription Osteobl bone
45 chr5:126169800-126181600 Weak transcription HSMM muscle
46 chr5:126169800-126181600 Weak transcription NHDF-Ad bronchial
47 chr5:126169800-126181800 Weak transcription Fetal Brain Male brain
48 chr5:126169800-126184800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr5:126170000-126179200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr5:126170000-126181400 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015