The 2.0 version of rSNPBase

Variant report

Variant rs72780213
Chromosome Location chr5:126165973-126165974
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126136000-126175200 Strong transcription Dnd41 blood
2 chr5:126137600-126166600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr5:126139800-126175400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr5:126140000-126175200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:126140000-126175400 Strong transcription Fetal Thymus thymus
6 chr5:126141000-126177400 Weak transcription Small Intestine intestine
7 chr5:126141200-126181800 Weak transcription Rectal Smooth Muscle rectum
8 chr5:126141400-126174200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:126141600-126167400 Weak transcription Brain Substantia Nigra brain
10 chr5:126144400-126173200 Weak transcription Esophagus oesophagus
11 chr5:126146000-126183200 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr5:126146000-126183600 Weak transcription Left Ventricle heart
13 chr5:126147600-126167600 Strong transcription GM12878-XiMat blood
14 chr5:126147800-126170400 Weak transcription Stomach Mucosa stomach
15 chr5:126147800-126171600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr5:126148200-126182400 Weak transcription HSMMtube muscle
17 chr5:126148200-126193200 Weak transcription Brain Angular Gyrus brain
18 chr5:126149200-126170000 Weak transcription Aorta Aorta
19 chr5:126149600-126181400 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr5:126151200-126175200 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr5:126151200-126175400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:126151400-126181400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr5:126151600-126166600 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr5:126151800-126175200 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr5:126152000-126172400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr5:126152200-126171200 Strong transcription Primary T cells fromperipheralblood blood
27 chr5:126152200-126173800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr5:126152200-126175200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr5:126152800-126167000 Weak transcription Psoas Muscle Psoas
30 chr5:126153400-126166600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr5:126153600-126175400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr5:126154200-126166200 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr5:126155800-126171200 Strong transcription K562 blood
34 chr5:126156000-126166200 Strong transcription Primary hematopoietic stem cells blood
35 chr5:126156400-126171800 Strong transcription Fetal Brain Female brain
36 chr5:126156600-126166000 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr5:126157200-126171000 Strong transcription Primary T cells from cord blood blood
38 chr5:126157400-126167800 Strong transcription Hela-S3 cervix
39 chr5:126158000-126204600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr5:126159400-126171200 Strong transcription HepG2 liver
41 chr5:126160000-126166000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr5:126160000-126171400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:126160600-126166000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr5:126160600-126166000 Strong transcription Fetal Stomach stomach
45 chr5:126160600-126172400 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr5:126160600-126172600 Strong transcription A549 lung
47 chr5:126160800-126166000 Strong transcription Primary T helper naive cells fromperipheralblood blood
48 chr5:126160800-126166000 Strong transcription Duodenum Mucosa Duodenum
49 chr5:126160800-126166000 Strong transcription Fetal Intestine Large intestine
50 chr5:126160800-126167200 Strong transcription HUVEC blood vessel

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Last update: Aug 31, 2015