The 2.0 version of rSNPBase

Variant report

Variant rs57798497
Chromosome Location chr1:76224295-76224296
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76192000-76227800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:76202000-76225000 Weak transcription Stomach Mucosa stomach
3 chr1:76203400-76230800 Weak transcription NHDF-Ad bronchial
4 chr1:76204800-76229000 Weak transcription Psoas Muscle Psoas
5 chr1:76208800-76231400 Weak transcription A549 lung
6 chr1:76208800-76231400 Weak transcription NHEK skin
7 chr1:76208800-76231600 Weak transcription Hela-S3 cervix
8 chr1:76209000-76230800 Weak transcription HUVEC blood vessel
9 chr1:76209000-76230800 Weak transcription NHLF lung
10 chr1:76210200-76231800 Weak transcription HSMMtube muscle
11 chr1:76211600-76230800 Weak transcription HMEC breast
12 chr1:76217600-76231400 Weak transcription Osteobl bone
13 chr1:76219600-76230600 Weak transcription Colon Smooth Muscle Colon
14 chr1:76220800-76226400 Weak transcription HepG2 liver
15 chr1:76220800-76228000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:76220800-76229600 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:76221200-76224400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:76221200-76229600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr1:76221200-76229800 Weak transcription Rectal Smooth Muscle rectum
20 chr1:76221200-76230200 Weak transcription Small Intestine intestine
21 chr1:76221200-76231400 Weak transcription Gastric stomach
22 chr1:76221200-76238400 Weak transcription Brain Cingulate Gyrus brain
23 chr1:76221400-76229000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:76221400-76230000 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:76221400-76230600 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:76221400-76230600 Weak transcription Colonic Mucosa Colon
27 chr1:76221400-76231200 Weak transcription NH-A brain
28 chr1:76221400-76231400 Weak transcription Pancreas Pancrea
29 chr1:76221400-76233200 Weak transcription Brain Anterior Caudate brain
30 chr1:76221600-76224600 Weak transcription Spleen Spleen
31 chr1:76221600-76227400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:76221600-76229000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:76221600-76229000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:76221600-76229400 Weak transcription Stomach Smooth Muscle stomach
35 chr1:76221600-76230800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:76221600-76230800 Weak transcription Lung lung
37 chr1:76221600-76231000 Weak transcription Aorta Aorta
38 chr1:76221600-76231000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:76221600-76231000 Weak transcription Right Ventricle heart
40 chr1:76221600-76231200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:76221600-76231400 Weak transcription Fetal Heart heart
42 chr1:76221600-76231400 Weak transcription Ovary ovary
43 chr1:76221600-76231400 Weak transcription HSMM muscle
44 chr1:76221600-76231600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:76221600-76231600 Weak transcription Esophagus oesophagus
46 chr1:76221600-76231800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr1:76221600-76232200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:76221600-76234200 Weak transcription Thymus Thymus
49 chr1:76221800-76226400 Weak transcription Dnd41 blood
50 chr1:76221800-76226800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015