Variant report

Variant rs57843942
Chromosome Location chr18:29085778-29085779
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29080400-29085800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr18:29080400-29091000 Weak transcription Colonic Mucosa Colon
3 chr18:29080600-29088400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr18:29080600-29088600 Weak transcription HMEC breast
5 chr18:29080600-29088800 Weak transcription A549 lung
6 chr18:29080600-29089600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr18:29080600-29093200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr18:29080600-29100000 Weak transcription Primary hematopoietic stem cells blood
9 chr18:29080600-29100400 Weak transcription Fetal Thymus thymus
10 chr18:29080800-29088600 Weak transcription Hela-S3 cervix
11 chr18:29080800-29092400 Weak transcription H1 Cell Line embryonic stem cell
12 chr18:29081000-29091400 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr18:29081600-29092000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr18:29081600-29092200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr18:29081600-29092200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr18:29081600-29093200 Weak transcription H9 Cell Line embryonic stem cell
17 chr18:29081800-29088000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr18:29081800-29088600 Weak transcription HepG2 liver
19 chr18:29081800-29092200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr18:29083400-29086800 Enhancers Placenta Amnion Placenta Amnion
21 chr18:29083400-29092600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr18:29084000-29090600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr18:29084400-29086400 Genic enhancers NHEK skin
24 chr18:29084600-29086600 Enhancers Fetal Intestine Large intestine
25 chr18:29084800-29086400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr18:29084800-29091000 Weak transcription Left Ventricle heart
27 chr18:29084800-29093600 Weak transcription Gastric stomach
28 chr18:29085000-29088600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr18:29085000-29088600 Weak transcription GM12878-XiMat blood
30 chr18:29085200-29085800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr18:29085200-29086200 Enhancers Rectal Mucosa Donor 31 rectum
32 chr18:29085200-29086400 Enhancers Rectal Mucosa Donor 29 rectum
33 chr18:29085200-29090600 Weak transcription Fetal Intestine Small intestine
34 chr18:29085200-29091000 Weak transcription Right Atrium heart
35 chr18:29085400-29086400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr18:29085400-29088600 Weak transcription Fetal Heart heart
37 chr18:29085400-29089600 Weak transcription Stomach Mucosa stomach
38 chr18:29085400-29090800 Weak transcription Pancreas Pancrea
39 chr18:29085400-29090800 Weak transcription K562 blood
40 chr18:29085600-29086000 Weak transcription Duodenum Mucosa Duodenum

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