Variant report
Variant | rs57843942 |
---|---|
Chromosome Location | chr18:29085778-29085779 |
allele | C/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr18:29080400-29085800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
2 | chr18:29080400-29091000 | Weak transcription | Colonic Mucosa | Colon |
3 | chr18:29080600-29088400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
4 | chr18:29080600-29088600 | Weak transcription | HMEC | breast |
5 | chr18:29080600-29088800 | Weak transcription | A549 | lung |
6 | chr18:29080600-29089600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
7 | chr18:29080600-29093200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
8 | chr18:29080600-29100000 | Weak transcription | Primary hematopoietic stem cells | blood |
9 | chr18:29080600-29100400 | Weak transcription | Fetal Thymus | thymus |
10 | chr18:29080800-29088600 | Weak transcription | Hela-S3 | cervix |
11 | chr18:29080800-29092400 | Weak transcription | H1 Cell Line | embryonic stem cell |
12 | chr18:29081000-29091400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
13 | chr18:29081600-29092000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
14 | chr18:29081600-29092200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
15 | chr18:29081600-29092200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
16 | chr18:29081600-29093200 | Weak transcription | H9 Cell Line | embryonic stem cell |
17 | chr18:29081800-29088000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
18 | chr18:29081800-29088600 | Weak transcription | HepG2 | liver |
19 | chr18:29081800-29092200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
20 | chr18:29083400-29086800 | Enhancers | Placenta Amnion | Placenta Amnion |
21 | chr18:29083400-29092600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
22 | chr18:29084000-29090600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
23 | chr18:29084400-29086400 | Genic enhancers | NHEK | skin |
24 | chr18:29084600-29086600 | Enhancers | Fetal Intestine Large | intestine |
25 | chr18:29084800-29086400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
26 | chr18:29084800-29091000 | Weak transcription | Left Ventricle | heart |
27 | chr18:29084800-29093600 | Weak transcription | Gastric | stomach |
28 | chr18:29085000-29088600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
29 | chr18:29085000-29088600 | Weak transcription | GM12878-XiMat | blood |
30 | chr18:29085200-29085800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
31 | chr18:29085200-29086200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
32 | chr18:29085200-29086400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
33 | chr18:29085200-29090600 | Weak transcription | Fetal Intestine Small | intestine |
34 | chr18:29085200-29091000 | Weak transcription | Right Atrium | heart |
35 | chr18:29085400-29086400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
36 | chr18:29085400-29088600 | Weak transcription | Fetal Heart | heart |
37 | chr18:29085400-29089600 | Weak transcription | Stomach Mucosa | stomach |
38 | chr18:29085400-29090800 | Weak transcription | Pancreas | Pancrea |
39 | chr18:29085400-29090800 | Weak transcription | K562 | blood |
40 | chr18:29085600-29086000 | Weak transcription | Duodenum Mucosa | Duodenum |