Variant report

Variant rs57882831
Chromosome Location chr5:145332444-145332445
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145319800-145366000 Weak transcription Fetal Stomach stomach
2 chr5:145322400-145337800 Weak transcription Colonic Mucosa Colon
3 chr5:145325400-145334600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr5:145325800-145354600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr5:145327200-145340000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr5:145327200-145340000 Weak transcription Hela-S3 cervix
7 chr5:145327400-145339800 Weak transcription HepG2 liver
8 chr5:145327600-145333000 Weak transcription Osteobl bone
9 chr5:145327600-145340000 Weak transcription NH-A brain
10 chr5:145328400-145334600 Weak transcription Small Intestine intestine
11 chr5:145328800-145332800 Weak transcription Left Ventricle heart
12 chr5:145329000-145334400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr5:145329000-145337800 Weak transcription Pancreas Pancrea
14 chr5:145329400-145336400 Weak transcription Fetal Intestine Large intestine
15 chr5:145329800-145335000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:145330000-145332800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:145330000-145338200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr5:145330000-145341400 Weak transcription Gastric stomach
19 chr5:145330000-145352000 Weak transcription Aorta Aorta
20 chr5:145330000-145353600 Weak transcription Esophagus oesophagus
21 chr5:145330000-145354600 Weak transcription Right Ventricle heart
22 chr5:145330200-145334400 Weak transcription Stomach Mucosa stomach
23 chr5:145330200-145336400 Weak transcription Liver Liver
24 chr5:145330400-145333400 Strong transcription NHEK skin
25 chr5:145331000-145333400 Enhancers Skeletal Muscle Female skeletal muscle
26 chr5:145331200-145332600 Weak transcription Fetal Heart heart
27 chr5:145331400-145334400 Weak transcription Duodenum Mucosa Duodenum
28 chr5:145331400-145336200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr5:145331400-145356600 Weak transcription Psoas Muscle Psoas
30 chr5:145331800-145332600 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr5:145332000-145337000 Weak transcription HMEC breast
32 chr5:145332200-145333000 Enhancers Right Atrium heart
33 chr5:145332200-145333400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:145332400-145335000 Weak transcription Fetal Intestine Small intestine

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