Variant report

Variant rs73310182
Chromosome Location chr5:145341593-145341594
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145319800-145366000 Weak transcription Fetal Stomach stomach
2 chr5:145325800-145354600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:145330000-145352000 Weak transcription Aorta Aorta
4 chr5:145330000-145353600 Weak transcription Esophagus oesophagus
5 chr5:145330000-145354600 Weak transcription Right Ventricle heart
6 chr5:145331400-145356600 Weak transcription Psoas Muscle Psoas
7 chr5:145333400-145354600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr5:145338400-145345600 Weak transcription Small Intestine intestine
9 chr5:145338600-145349000 Weak transcription Pancreas Pancrea
10 chr5:145338600-145360800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:145339400-145341600 Enhancers Placenta Amnion Placenta Amnion
12 chr5:145339600-145342000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr5:145339600-145342000 Enhancers HMEC breast
14 chr5:145339600-145342400 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr5:145340000-145341600 Enhancers Osteobl bone
16 chr5:145340000-145341800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr5:145340000-145342000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr5:145340000-145342000 Enhancers Stomach Mucosa stomach
19 chr5:145340000-145342000 Enhancers Hela-S3 cervix
20 chr5:145340200-145345000 Weak transcription HepG2 liver
21 chr5:145340400-145341800 Enhancers Placenta Placenta
22 chr5:145340400-145342200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:145340600-145345000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:145340600-145345200 Weak transcription Liver Liver
25 chr5:145340600-145345400 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr5:145340800-145341800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr5:145340800-145348200 Weak transcription A549 lung
28 chr5:145340800-145352000 Weak transcription Fetal Intestine Large intestine
29 chr5:145341200-145349000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr5:145341200-145353400 Weak transcription Duodenum Mucosa Duodenum
31 chr5:145341400-145341600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr5:145341400-145341600 Genic enhancers Fetal Intestine Small intestine
33 chr5:145341400-145341600 Enhancers Gastric stomach
34 chr5:145341400-145341600 Enhancers NHEK skin
35 chr5:145341400-145341800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr5:145341400-145342400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:145341400-145343200 Weak transcription NH-A brain

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