Variant report

Variant rs58036240
Chromosome Location chr17:59489787-59489788
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59486200-59489800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr17:59486400-59490600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
3 chr17:59486400-59490800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr17:59486600-59491000 Active TSS Aorta Aorta
5 chr17:59487000-59489800 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
6 chr17:59487400-59490400 Bivalent Enhancer Fetal Brain Male brain
7 chr17:59487600-59490800 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
8 chr17:59487800-59489800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
9 chr17:59487800-59489800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
10 chr17:59487800-59489800 Active TSS Right Atrium heart
11 chr17:59487800-59490400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr17:59487800-59490600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
13 chr17:59487800-59490600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
14 chr17:59487800-59490800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
15 chr17:59488000-59489800 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
16 chr17:59488000-59489800 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
17 chr17:59488000-59489800 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
18 chr17:59488000-59490200 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood
19 chr17:59488000-59490200 Active TSS Muscle Satellite Cultured Cells --
20 chr17:59488000-59490400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
21 chr17:59488000-59490600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
22 chr17:59488000-59490600 Active TSS Fetal Lung lung
23 chr17:59488000-59490800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
24 chr17:59488000-59490800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr17:59488200-59489800 Bivalent/Poised TSS Primary T cells from cord blood blood
26 chr17:59488200-59490200 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
27 chr17:59488200-59490200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr17:59488200-59490200 Active TSS Left Ventricle heart
29 chr17:59488200-59490400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
30 chr17:59488200-59490400 Active TSS Breast Myoepithelial Primary Cells Breast
31 chr17:59488200-59490400 Active TSS NHLF lung
32 chr17:59488200-59490600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
33 chr17:59488200-59490600 Active TSS Brain Angular Gyrus brain
34 chr17:59488200-59490600 Bivalent/Poised TSS Colon Smooth Muscle Colon
35 chr17:59488200-59490600 Active TSS Esophagus oesophagus
36 chr17:59488200-59490600 Active TSS Gastric stomach
37 chr17:59488200-59490800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
38 chr17:59488200-59490800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
39 chr17:59488200-59490800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr17:59488200-59490800 Active TSS Brain Anterior Caudate brain
41 chr17:59488200-59491000 Active TSS Fetal Kidney kidney
42 chr17:59488400-59489800 Flanking Bivalent TSS/Enh Primary B cells from peripheral blood blood
43 chr17:59488400-59489800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
44 chr17:59488400-59490200 Active TSS Brain Substantia Nigra brain
45 chr17:59488400-59490200 Weak transcription Fetal Heart heart
46 chr17:59488400-59490200 Active TSS Small Intestine intestine
47 chr17:59488400-59490400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
48 chr17:59488400-59490400 Flanking Active TSS Liver Liver
49 chr17:59488400-59491000 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr17:59488400-59491000 Flanking Active TSS Placenta Placenta

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