Variant report

Variant rs58832799
Chromosome Location chr17:59483756-59483757
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59478000-59485400 Transcr. at gene 5' and 3' Fetal Lung lung
2 chr17:59478000-59488200 Transcr. at gene 5' and 3' NHLF lung
3 chr17:59478200-59487600 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
4 chr17:59478200-59487800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
5 chr17:59478600-59486400 Weak transcription A549 lung
6 chr17:59479000-59486600 Weak transcription HSMMtube muscle
7 chr17:59479400-59484000 Active TSS Ovary ovary
8 chr17:59479400-59487200 Weak transcription Hela-S3 cervix
9 chr17:59479600-59483800 Weak transcription HepG2 liver
10 chr17:59480200-59486400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
11 chr17:59480400-59484000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
12 chr17:59480400-59486000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr17:59480400-59486200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr17:59480400-59486400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
15 chr17:59480400-59488000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
16 chr17:59481600-59484600 Weak transcription NHDF-Ad bronchial
17 chr17:59481600-59485800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr17:59482200-59485400 Strong transcription Muscle Satellite Cultured Cells --
19 chr17:59482200-59486400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr17:59482400-59486200 Weak transcription Aorta Aorta
21 chr17:59482800-59486000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr17:59483000-59483800 Bivalent/Poised TSS Fetal Stomach stomach
23 chr17:59483000-59486200 Weak transcription Pancreas Pancrea
24 chr17:59483200-59483800 Bivalent/Poised TSS Brain Anterior Caudate brain
25 chr17:59483200-59485400 Bivalent/Poised TSS Fetal Kidney kidney
26 chr17:59483200-59486600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr17:59483400-59485400 Bivalent/Poised TSS Stomach Smooth Muscle stomach
28 chr17:59483400-59486200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr17:59483400-59486400 Weak transcription Right Atrium heart
30 chr17:59483600-59483800 Bivalent/Poised TSS Colonic Mucosa Colon
31 chr17:59483600-59483800 Bivalent Enhancer Fetal Muscle Leg muscle
32 chr17:59483600-59483800 Flanking Active TSS Placenta Placenta
33 chr17:59483600-59483800 Flanking Active TSS Right Ventricle heart
34 chr17:59483600-59483800 Genic enhancers Osteobl bone
35 chr17:59483600-59484000 Bivalent Enhancer Adipose Nuclei Adipose
36 chr17:59483600-59484000 Bivalent Enhancer Fetal Intestine Small intestine
37 chr17:59483600-59484400 Active TSS Lung lung
38 chr17:59483600-59484600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
39 chr17:59483600-59485000 Weak transcription Gastric stomach

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