Variant report

Variant rs58039341
Chromosome Location chr12:50137853-50137854
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50135000-50138200 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr12:50135000-50138200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr12:50136200-50138000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr12:50136400-50138000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr12:50136400-50138800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr12:50136400-50140800 Weak transcription Gastric stomach
7 chr12:50136600-50138000 Enhancers Cortex derived primary cultured neurospheres brain
8 chr12:50136600-50138000 Flanking Active TSS Hela-S3 cervix
9 chr12:50136600-50138200 Enhancers Primary monocytes fromperipheralblood blood
10 chr12:50136600-50138600 Enhancers Small Intestine intestine
11 chr12:50136600-50139000 Flanking Active TSS Liver Liver
12 chr12:50136600-50146400 Weak transcription H9 Cell Line embryonic stem cell
13 chr12:50136800-50138000 Enhancers Rectal Mucosa Donor 31 rectum
14 chr12:50136800-50138200 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr12:50136800-50138200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:50136800-50138200 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr12:50136800-50138400 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr12:50136800-50138400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr12:50136800-50138600 Enhancers Brain Angular Gyrus brain
20 chr12:50136800-50138600 Transcr. at gene 5' and 3' NHEK skin
21 chr12:50136800-50139000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr12:50136800-50139000 Genic enhancers Primary B cells from cord blood blood
23 chr12:50136800-50144200 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr12:50136800-50146600 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr12:50137000-50138000 Enhancers Primary B cells from peripheral blood blood
26 chr12:50137000-50138200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr12:50137000-50138200 Enhancers Primary hematopoietic stem cells blood
28 chr12:50137000-50138200 Enhancers Fetal Brain Female brain
29 chr12:50137000-50138200 Enhancers Sigmoid Colon Sigmoid Colon
30 chr12:50137000-50138200 Weak transcription Thymus Thymus
31 chr12:50137000-50138200 Enhancers Monocytes-CD14+_RO01746 blood
32 chr12:50137000-50138400 Enhancers Primary neutrophils fromperipheralblood blood
33 chr12:50137000-50138400 Enhancers Fetal Lung lung
34 chr12:50137000-50138400 Enhancers Stomach Mucosa stomach
35 chr12:50137000-50138600 Enhancers Brain Anterior Caudate brain
36 chr12:50137000-50138600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr12:50137000-50138800 Enhancers Rectal Smooth Muscle rectum
38 chr12:50137000-50139200 Enhancers Brain Cingulate Gyrus brain
39 chr12:50137000-50139200 Enhancers Colon Smooth Muscle Colon
40 chr12:50137000-50142000 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr12:50137000-50142200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr12:50137000-50143800 Weak transcription Colonic Mucosa Colon
43 chr12:50137000-50146200 Weak transcription HSMMtube muscle
44 chr12:50137000-50147000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr12:50137200-50138000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr12:50137200-50138000 Weak transcription Brain Substantia Nigra brain
47 chr12:50137200-50138200 Weak transcription Esophagus oesophagus
48 chr12:50137200-50138200 Weak transcription Ovary ovary
49 chr12:50137200-50138400 Enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr12:50137200-50138600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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