The 2.0 version of rSNPBase

Variant report

Variant rs58111601
Chromosome Location chr6:163913285-163913286
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:163898400-163926000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:163902200-163913600 Enhancers Brain Anterior Caudate brain
3 chr6:163902600-163921800 Weak transcription HepG2 liver
4 chr6:163903000-163915000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr6:163903000-163924200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:163903600-163926000 Weak transcription Lung lung
7 chr6:163904000-163917400 Weak transcription Fetal Muscle Leg muscle
8 chr6:163905000-163918400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:163905200-163915400 Enhancers Fetal Heart heart
10 chr6:163905800-163921800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:163906800-163916800 Enhancers Cortex derived primary cultured neurospheres brain
12 chr6:163906800-163919400 Weak transcription Ovary ovary
13 chr6:163907000-163913400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:163907200-163915400 Weak transcription Right Ventricle heart
15 chr6:163907200-163925000 Weak transcription Fetal Muscle Trunk muscle
16 chr6:163907200-163926000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr6:163908600-163917200 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr6:163908800-163915000 Weak transcription GM12878-XiMat blood
19 chr6:163909200-163921000 Weak transcription Primary B cells from cord blood blood
20 chr6:163909400-163923800 Weak transcription Aorta Aorta
21 chr6:163909600-163922600 Weak transcription Fetal Brain Female brain
22 chr6:163910600-163914200 Weak transcription Left Ventricle heart
23 chr6:163910600-163915200 Weak transcription Right Atrium heart
24 chr6:163910800-163915200 Weak transcription NHDF-Ad bronchial
25 chr6:163911200-163917600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr6:163911200-163926000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:163911200-163926200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:163911600-163913600 Enhancers Brain Hippocampus Middle brain
29 chr6:163911600-163928000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:163911800-163914600 Weak transcription Psoas Muscle Psoas
31 chr6:163911800-163914600 Weak transcription K562 blood
32 chr6:163911800-163915400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:163911800-163915400 Weak transcription HSMM muscle
34 chr6:163911800-163917000 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr6:163911800-163934800 Weak transcription Pancreas Pancrea
36 chr6:163912000-163914000 Enhancers Liver Liver
37 chr6:163912000-163914800 Weak transcription Brain Germinal Matrix brain
38 chr6:163912000-163915200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:163912000-163918600 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr6:163912200-163914400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:163912200-163915200 Weak transcription Muscle Satellite Cultured Cells --
42 chr6:163912200-163915200 Weak transcription Osteobl bone
43 chr6:163912200-163917200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr6:163912200-163917200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr6:163912200-163917200 Weak transcription Adipose Nuclei Adipose
46 chr6:163912200-163920800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr6:163912200-163921600 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr6:163912200-163921600 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr6:163912400-163913400 Enhancers NH-A brain
50 chr6:163912400-163915200 Weak transcription NHEK skin

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Last update: Aug 31, 2015