Variant report

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:55693146-55693861	HepG2	liver:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:55691908..55694093-chr19:55710384..55713231,2	K562	blood:
2	chr19:55692071..55693997-chr19:55950294..55952770,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EPS8L1-2	chr19:55691523-55695370	l_1714_chr19:55688749-55693967_brain

No data

Variant related genes	Relation type
SYT5	TF binding region

rSNPs within LD-proxies of this variant (count:11)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1816335	chr19:55683977-55901099	Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:55691200-55718200	Weak transcription	Right Atrium	heart
2	chr19:55691600-55718200	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr19:55691800-55717600	Strong transcription	Fetal Intestine Small	intestine
4	chr19:55692000-55696800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr19:55692000-55697000	Weak transcription	HepG2	liver
6	chr19:55692000-55697600	Weak transcription	Hela-S3	cervix
7	chr19:55692000-55707800	Weak transcription	K562	blood
8	chr19:55692200-55710000	Weak transcription	Pancreas	Pancrea
9	chr19:55692600-55701200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr19:55692600-55717000	Strong transcription	Duodenum Mucosa	Duodenum
11	chr19:55692800-55694400	Strong transcription	Rectal Mucosa Donor 29	rectum
12	chr19:55693000-55693600	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr19:55693000-55702800	Weak transcription	Fetal Intestine Large	intestine
14	chr19:55693200-55694000	Strong transcription	Gastric	stomach
15	chr19:55693400-55693800	Strong transcription	Spleen	Spleen

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