The 2.0 version of rSNPBase

Variant report

Variant rs73935320
Chromosome Location chr19:55691985-55691986
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55690200-55692000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
2 chr19:55690200-55692000 Bivalent Enhancer Placenta Placenta
3 chr19:55690200-55692200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
4 chr19:55690400-55692000 Enhancers Gastric stomach
5 chr19:55690600-55692000 Bivalent Enhancer Lung lung
6 chr19:55690800-55692000 Enhancers Fetal Heart heart
7 chr19:55691000-55692000 Bivalent Enhancer Fetal Muscle Leg muscle
8 chr19:55691000-55692200 Bivalent Enhancer Fetal Muscle Trunk muscle
9 chr19:55691200-55692000 Bivalent/Poised TSS Fetal Brain Female brain
10 chr19:55691200-55692000 Flanking Active TSS Hela-S3 cervix
11 chr19:55691200-55692000 Enhancers HepG2 liver
12 chr19:55691200-55692200 Bivalent Enhancer Primary B cells from peripheral blood blood
13 chr19:55691200-55692200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
14 chr19:55691200-55692200 Enhancers Pancreas Pancrea
15 chr19:55691200-55692200 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
16 chr19:55691200-55718200 Weak transcription Right Atrium heart
17 chr19:55691400-55692000 Bivalent Enhancer Primary B cells from cord blood blood
18 chr19:55691400-55692000 Enhancers Primary hematopoietic stem cells blood
19 chr19:55691400-55692000 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr19:55691400-55692200 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr19:55691400-55692200 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
22 chr19:55691400-55692400 Bivalent Enhancer Primary T cells fromperipheralblood blood
23 chr19:55691600-55692000 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
24 chr19:55691600-55692000 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
25 chr19:55691600-55692000 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
26 chr19:55691600-55692000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:55691600-55692000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr19:55691600-55692000 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
29 chr19:55691600-55692000 Enhancers Brain Cingulate Gyrus brain
30 chr19:55691600-55692000 Bivalent Enhancer Thymus Thymus
31 chr19:55691600-55692200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr19:55691600-55692200 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
33 chr19:55691600-55692200 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
34 chr19:55691600-55718200 Weak transcription Placenta Amnion Placenta Amnion
35 chr19:55691800-55692000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr19:55691800-55692000 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
37 chr19:55691800-55692000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:55691800-55692000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
39 chr19:55691800-55692000 Flanking Active TSS Brain Angular Gyrus brain
40 chr19:55691800-55692000 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
41 chr19:55691800-55692000 Bivalent Enhancer Brain Hippocampus Middle brain
42 chr19:55691800-55692000 Bivalent Enhancer Colonic Mucosa Colon
43 chr19:55691800-55692000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
44 chr19:55691800-55692000 Flanking Bivalent TSS/Enh Fetal Brain Male brain
45 chr19:55691800-55692000 Bivalent Enhancer Right Ventricle heart
46 chr19:55691800-55692000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
47 chr19:55691800-55692000 Bivalent Enhancer Dnd41 blood
48 chr19:55691800-55692000 Enhancers K562 blood
49 chr19:55691800-55692000 Bivalent Enhancer NH-A brain
50 chr19:55691800-55692200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015