Variant report

(count:15 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr19:55695127-55695329	K562	blood:	n/a	n/a
2	CEBPB	chr19:55694997-55695385	K562	blood:	n/a	n/a
3	TEAD4	chr19:55694978-55695416	K562	blood:	n/a	n/a
4	POLR2A	chr19:55695066-55695401	K562	blood:	n/a	n/a
5	CEBPB	chr19:55695059-55695315	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr19:55695113-55695313	K562	blood:	n/a	n/a
7	POLR2A	chr19:55695072-55695402	HepG2	liver:	n/a	n/a
8	CEBPB	chr19:55695061-55695352	K562	blood:	n/a	n/a
9	POLR2A	chr19:55695090-55695418	HepG2	liver:	n/a	n/a
10	MAZ	chr19:55695093-55695360	K562	blood:	n/a	n/a
11	POLR2A	chr19:55694887-55695412	HepG2	liver:	n/a	n/a
12	POLR2A	chr19:55695036-55695426	HepG2	liver:	n/a	n/a
13	RCOR1	chr19:55695109-55695385	K562	blood:	n/a	n/a
14	ZMIZ1	chr19:55695187-55695325	K562	blood:	n/a	n/a
15	JUND	chr19:55695100-55695369	K562	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:55694739..55698576-chr19:55700961..55704975,5	K562	blood:
2	chr19:55689515..55694212-chr19:55695255..55700390,7	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EPS8L1-2	chr19:55691523-55695370	l_1714_chr19:55688749-55693967_brain

No data

Variant related genes	Relation type
SYT5	TF binding region
ENSG00000129990	Chromatin interaction

rSNPs within LD-proxies of this variant (count:11)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1816335	chr19:55683977-55901099	Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:55691200-55718200	Weak transcription	Right Atrium	heart
2	chr19:55691600-55718200	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr19:55691800-55717600	Strong transcription	Fetal Intestine Small	intestine
4	chr19:55692000-55696800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr19:55692000-55697000	Weak transcription	HepG2	liver
6	chr19:55692000-55697600	Weak transcription	Hela-S3	cervix
7	chr19:55692000-55707800	Weak transcription	K562	blood
8	chr19:55692200-55710000	Weak transcription	Pancreas	Pancrea
9	chr19:55692600-55701200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr19:55692600-55717000	Strong transcription	Duodenum Mucosa	Duodenum
11	chr19:55693000-55702800	Weak transcription	Fetal Intestine Large	intestine
12	chr19:55693800-55696800	Weak transcription	Spleen	Spleen
13	chr19:55693800-55700200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr19:55694000-55696800	Weak transcription	Gastric	stomach
15	chr19:55694400-55696600	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr19:55694600-55702200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr19:55695200-55696600	Weak transcription	Stomach Mucosa	stomach

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