The 2.0 version of rSNPBase

Variant report

Variant rs58203825
Chromosome Location chr1:114509039-114509040
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114479000-114517600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:114484000-114510400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:114484000-114510400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:114484000-114511200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:114484400-114510400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:114485000-114510400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:114489800-114510400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:114490200-114510800 Weak transcription A549 lung
9 chr1:114490600-114512000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:114492800-114518600 Strong transcription Dnd41 blood
11 chr1:114493400-114517600 Strong transcription Fetal Thymus thymus
12 chr1:114495400-114517400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:114495800-114516800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:114495800-114518200 Strong transcription Primary B cells from peripheral blood blood
15 chr1:114496000-114517000 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr1:114496400-114516000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:114496400-114516400 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr1:114496400-114517000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:114496400-114517200 Strong transcription Primary monocytes fromperipheralblood blood
20 chr1:114496400-114517400 Strong transcription Primary neutrophils fromperipheralblood blood
21 chr1:114496400-114517600 Strong transcription Duodenum Mucosa Duodenum
22 chr1:114496400-114518200 Strong transcription K562 blood
23 chr1:114496400-114519400 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:114496600-114518800 Strong transcription Primary B cells from cord blood blood
25 chr1:114497000-114516400 Strong transcription Fetal Intestine Large intestine
26 chr1:114497000-114517000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:114497200-114516400 Strong transcription Primary hematopoietic stem cells blood
28 chr1:114497200-114516400 Strong transcription GM12878-XiMat blood
29 chr1:114497600-114517600 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr1:114497800-114517400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:114498000-114517400 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr1:114498800-114518200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:114499600-114511200 Weak transcription Stomach Mucosa stomach
34 chr1:114500000-114517600 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr1:114501000-114510200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:114501800-114516800 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr1:114502000-114511200 Weak transcription Fetal Heart heart
38 chr1:114502200-114510200 Weak transcription Right Ventricle heart
39 chr1:114502800-114510400 Weak transcription Ovary ovary
40 chr1:114503800-114517400 Strong transcription Placenta Placenta
41 chr1:114503800-114518600 Strong transcription Brain Germinal Matrix brain
42 chr1:114504000-114514800 Strong transcription Hela-S3 cervix
43 chr1:114504200-114516800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:114504400-114509200 Strong transcription Left Ventricle heart
45 chr1:114504400-114517000 Strong transcription Osteobl bone
46 chr1:114504600-114517600 Strong transcription HSMM muscle
47 chr1:114504600-114517800 Strong transcription Primary T killer memory cells from peripheral blood blood
48 chr1:114504600-114519000 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr1:114504800-114509400 Strong transcription HUVEC blood vessel
50 chr1:114504800-114510400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015