Variant report

Variant rs58298509
Chromosome Location chr22:20777289-20777290
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20761800-20779200 Weak transcription Placenta Amnion Placenta Amnion
2 chr22:20762600-20779400 Weak transcription Lung lung
3 chr22:20772800-20777800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr22:20773000-20777400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:20773000-20777400 Weak transcription Fetal Brain Female brain
6 chr22:20773000-20777400 Weak transcription Left Ventricle heart
7 chr22:20773000-20777400 Weak transcription Pancreas Pancrea
8 chr22:20773000-20777400 Weak transcription Psoas Muscle Psoas
9 chr22:20773000-20779400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr22:20773000-20781200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr22:20773000-20783000 Weak transcription HUVEC blood vessel
12 chr22:20773200-20777400 Weak transcription Spleen Spleen
13 chr22:20773200-20779000 Weak transcription Muscle Satellite Cultured Cells --
14 chr22:20773800-20777800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:20773800-20779000 Weak transcription Fetal Heart heart
16 chr22:20774600-20777600 Strong transcription Right Atrium heart
17 chr22:20775000-20777800 Enhancers Brain Inferior Temporal Lobe brain
18 chr22:20775400-20777600 Weak transcription Gastric stomach
19 chr22:20775600-20777400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr22:20776000-20779200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr22:20776200-20780200 Enhancers Fetal Brain Male brain
22 chr22:20776400-20777400 Enhancers Fetal Thymus thymus
23 chr22:20776400-20777600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr22:20776400-20777800 Enhancers Fetal Muscle Leg muscle
25 chr22:20776400-20778000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr22:20776400-20778000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr22:20776400-20778000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr22:20776400-20778200 Enhancers Fetal Muscle Trunk muscle
29 chr22:20776400-20778200 Enhancers NH-A brain
30 chr22:20776400-20778200 Enhancers Osteobl bone
31 chr22:20776400-20778400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr22:20776400-20778600 Enhancers Primary T cells from cord blood blood
33 chr22:20776400-20778800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr22:20776400-20778800 Enhancers Primary hematopoietic stem cells blood
35 chr22:20776400-20778800 Enhancers Fetal Lung lung
36 chr22:20776400-20779000 Enhancers Colon Smooth Muscle Colon
37 chr22:20776400-20779200 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr22:20776400-20779200 Enhancers NHDF-Ad bronchial
39 chr22:20776400-20779600 Bivalent Enhancer Fetal Stomach stomach
40 chr22:20776600-20777400 Enhancers Thymus Thymus
41 chr22:20776600-20777400 Enhancers Dnd41 blood
42 chr22:20776600-20777600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr22:20776600-20777600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr22:20776600-20777600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr22:20776600-20778200 Enhancers HSMM muscle
46 chr22:20776600-20778400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr22:20776600-20778400 Enhancers Ovary ovary
48 chr22:20776600-20778600 Enhancers Skeletal Muscle Female skeletal muscle
49 chr22:20776600-20778600 Enhancers HSMMtube muscle
50 chr22:20776600-20779000 Enhancers Breast Myoepithelial Primary Cells Breast

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