The 2.0 version of rSNPBase

Variant report

Variant rs58305637
Chromosome Location chr1:179054529-179054530
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179052200-179062200 Weak transcription Small Intestine intestine
2 chr1:179052400-179054600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:179052400-179054800 Weak transcription Aorta Aorta
4 chr1:179052400-179054800 Weak transcription Brain Germinal Matrix brain
5 chr1:179052400-179054800 Weak transcription Brain Substantia Nigra brain
6 chr1:179052400-179054800 Weak transcription Left Ventricle heart
7 chr1:179052400-179054800 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:179052400-179054800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:179052400-179056000 Weak transcription Primary hematopoietic stem cells blood
10 chr1:179052400-179056000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:179052400-179056200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:179052400-179056400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:179052400-179056600 Weak transcription Right Atrium heart
14 chr1:179052400-179056600 Weak transcription HUVEC blood vessel
15 chr1:179052400-179058800 Weak transcription NH-A brain
16 chr1:179052400-179059000 Weak transcription Psoas Muscle Psoas
17 chr1:179052400-179060000 Weak transcription Brain Angular Gyrus brain
18 chr1:179052400-179060200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:179052400-179060800 Weak transcription Fetal Lung lung
20 chr1:179052400-179062600 Weak transcription Fetal Kidney kidney
21 chr1:179052600-179054600 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr1:179052600-179054800 Weak transcription Brain Cingulate Gyrus brain
23 chr1:179052600-179054800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:179052600-179056000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:179052600-179056200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:179052600-179056800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:179052600-179057000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:179052600-179058800 Weak transcription NHDF-Ad bronchial
29 chr1:179052600-179064200 Weak transcription Fetal Brain Male brain
30 chr1:179052800-179054800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:179052800-179054800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:179052800-179054800 Weak transcription Esophagus oesophagus
33 chr1:179052800-179055000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:179052800-179055000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:179052800-179056200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:179052800-179057400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:179052800-179059400 Weak transcription Fetal Heart heart
38 chr1:179053000-179054600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:179053000-179054800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:179053000-179055800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:179053000-179056200 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:179053000-179056600 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:179053000-179059600 Weak transcription HSMM muscle
44 chr1:179053000-179060400 Strong transcription Stomach Smooth Muscle stomach
45 chr1:179053000-179072200 Strong transcription Primary T cells from cord blood blood
46 chr1:179053200-179054600 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:179053200-179054600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr1:179053200-179054600 Weak transcription Fetal Brain Female brain
49 chr1:179053200-179054600 Weak transcription Pancreas Pancrea
50 chr1:179053200-179054600 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015