The 2.0 version of rSNPBase

Variant report

Variant rs73043669
Chromosome Location chr1:179001891-179001892
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178996200-179003200 Weak transcription Gastric stomach
2 chr1:178996200-179009200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:178996400-179003200 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:178996400-179003200 Weak transcription Esophagus oesophagus
5 chr1:178996400-179006200 Weak transcription Fetal Stomach stomach
6 chr1:178996400-179011200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:178996600-179004000 Weak transcription Fetal Kidney kidney
8 chr1:178996800-179002600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:178996800-179003000 Weak transcription Right Ventricle heart
10 chr1:178996800-179003200 Weak transcription Thymus Thymus
11 chr1:178997000-179003200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:178997000-179003200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:178997000-179005800 Weak transcription Brain Substantia Nigra brain
14 chr1:178997200-179003200 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr1:178997600-179002200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:178997600-179002200 Flanking Active TSS GM12878-XiMat blood
17 chr1:178997800-179004800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:178998200-179002000 Enhancers Adipose Nuclei Adipose
19 chr1:178998200-179002200 Enhancers NHEK skin
20 chr1:178998200-179002400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:178998200-179002400 Enhancers Fetal Heart heart
22 chr1:178998200-179002600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:178998200-179004800 Enhancers Skeletal Muscle Male skeletal muscle
24 chr1:178998200-179004800 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:178998200-179008600 Enhancers Colon Smooth Muscle Colon
26 chr1:178998400-179002200 Enhancers A549 lung
27 chr1:178998400-179003200 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:178998600-179002600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:178998600-179002800 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:178998600-179003200 Weak transcription Brain Anterior Caudate brain
32 chr1:178998600-179003200 Weak transcription Spleen Spleen
33 chr1:178998600-179003200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:178998600-179004200 Weak transcription Pancreas Pancrea
35 chr1:178998600-179006000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:178998600-179007600 Weak transcription Brain Cingulate Gyrus brain
37 chr1:178998600-179008000 Weak transcription Placenta Placenta
38 chr1:178998800-179002200 Weak transcription Small Intestine intestine
39 chr1:178998800-179002600 Enhancers NHLF lung
40 chr1:178998800-179003200 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:178998800-179003200 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:178998800-179003200 Weak transcription Brain Hippocampus Middle brain
43 chr1:178998800-179003200 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:178998800-179003600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:178998800-179005800 Weak transcription Brain Angular Gyrus brain
46 chr1:178999000-179003200 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr1:178999000-179003400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:178999000-179009600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:178999200-179003200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:178999600-179003200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015