The 2.0 version of rSNPBase

Variant report

Variant rs58326257
Chromosome Location chr2:53976983-53976984
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53908600-53982200 Weak transcription Small Intestine intestine
2 chr2:53910000-53994000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr2:53910200-53990600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr2:53918400-53994000 Weak transcription Fetal Heart heart
5 chr2:53925400-53979400 Weak transcription Psoas Muscle Psoas
6 chr2:53936600-53978600 Weak transcription Hela-S3 cervix
7 chr2:53936800-53985400 Weak transcription Stomach Smooth Muscle stomach
8 chr2:53937000-53983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:53937000-53994400 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:53937200-53978600 Weak transcription NH-A brain
11 chr2:53937200-53983600 Weak transcription Right Ventricle heart
12 chr2:53937200-53994200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:53937400-53979600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:53937400-53990200 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr2:53937400-53994400 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr2:53938400-53982800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr2:53938400-53983400 Weak transcription HSMMtube muscle
18 chr2:53938400-53992400 Weak transcription K562 blood
19 chr2:53943800-53983600 Weak transcription Ovary ovary
20 chr2:53943800-53983600 Weak transcription Thymus Thymus
21 chr2:53943800-53983800 Weak transcription Left Ventricle heart
22 chr2:53952200-53978600 Weak transcription Osteobl bone
23 chr2:53952400-53983600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:53954800-53982000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr2:53954800-53983800 Weak transcription Lung lung
26 chr2:53956000-53979600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr2:53956000-53983400 Weak transcription Fetal Brain Male brain
28 chr2:53956200-53983000 Weak transcription Fetal Muscle Leg muscle
29 chr2:53957000-53983800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:53957800-53983400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr2:53958000-53977800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr2:53958200-53994400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:53960400-53983400 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr2:53961800-53979400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:53962000-53978200 Weak transcription HMEC breast
36 chr2:53962200-53983400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr2:53963000-53994000 Weak transcription A549 lung
38 chr2:53964000-53983600 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr2:53964200-53978000 Weak transcription NHLF lung
40 chr2:53964600-53978400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:53964600-53982400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:53964600-53983000 Weak transcription Fetal Lung lung
43 chr2:53964800-53977400 Weak transcription Brain Germinal Matrix brain
44 chr2:53966200-53982600 Weak transcription Primary B cells from peripheral blood blood
45 chr2:53967200-53990200 Weak transcription Gastric stomach
46 chr2:53968600-53983400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr2:53969400-53979400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:53969400-53982200 Weak transcription Brain Substantia Nigra brain
49 chr2:53969400-53983400 Weak transcription Brain Angular Gyrus brain
50 chr2:53969600-53983400 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015