The 2.0 version of rSNPBase

Variant report

Variant rs2909262
Chromosome Location chr2:54008772-54008773
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53995600-54009000 Weak transcription Fetal Muscle Trunk muscle
2 chr2:53995600-54009000 Weak transcription Lung lung
3 chr2:53995600-54011400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:53995600-54011400 Weak transcription Right Atrium heart
5 chr2:53995600-54011600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:53995600-54012000 Weak transcription Left Ventricle heart
7 chr2:53995600-54012800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:53995800-54011400 Weak transcription Colon Smooth Muscle Colon
9 chr2:53995800-54011600 Weak transcription Psoas Muscle Psoas
10 chr2:53995800-54011800 Weak transcription Right Ventricle heart
11 chr2:53995800-54012000 Weak transcription Adipose Nuclei Adipose
12 chr2:53995800-54012200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:53995800-54012400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:53995800-54012600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr2:53996000-54009000 Weak transcription Brain Substantia Nigra brain
16 chr2:53996000-54011000 Weak transcription Fetal Brain Male brain
17 chr2:53996000-54011200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:53996000-54011600 Weak transcription Muscle Satellite Cultured Cells --
19 chr2:53996000-54011600 Weak transcription Fetal Lung lung
20 chr2:53996000-54011800 Weak transcription NHDF-Ad bronchial
21 chr2:53996200-54009800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:53996200-54011000 Weak transcription Brain Angular Gyrus brain
23 chr2:53996200-54011400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr2:53996200-54012600 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr2:53996400-54009000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr2:53996400-54009000 Weak transcription Brain Germinal Matrix brain
27 chr2:53996400-54009200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr2:53996400-54009400 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr2:53996400-54011000 Weak transcription NHEK skin
30 chr2:53996400-54011200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr2:53996400-54011200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr2:53996400-54011200 Weak transcription Brain Cingulate Gyrus brain
33 chr2:53996400-54011400 Weak transcription Thymus Thymus
34 chr2:53996400-54011600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr2:53996400-54011800 Weak transcription H9 Cell Line embryonic stem cell
36 chr2:53996400-54011800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr2:53996400-54012200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:53996400-54012400 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr2:53996600-54010600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr2:53996600-54011400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr2:53996800-54010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr2:53996800-54011200 Weak transcription Duodenum Mucosa Duodenum
43 chr2:53997000-54009200 Weak transcription Brain Inferior Temporal Lobe brain
44 chr2:53997000-54010800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr2:53997000-54011400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr2:53997000-54011600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:53997200-54010600 Weak transcription Hela-S3 cervix
48 chr2:53998200-54010600 Weak transcription HepG2 liver
49 chr2:53998800-54011200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:54000800-54009600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015