The 2.0 version of rSNPBase

Variant report

Variant rs2692521
Chromosome Location chr2:54036819-54036820
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54015200-54038200 Weak transcription Small Intestine intestine
2 chr2:54015200-54046200 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:54015200-54046200 Weak transcription Aorta Aorta
4 chr2:54015200-54051600 Weak transcription Stomach Mucosa stomach
5 chr2:54015200-54053800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:54015600-54054600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr2:54015800-54038400 Weak transcription Fetal Heart heart
8 chr2:54015800-54054000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:54016400-54043000 Weak transcription Gastric stomach
10 chr2:54020200-54046200 Weak transcription Colonic Mucosa Colon
11 chr2:54020600-54047200 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr2:54020600-54048400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:54020600-54048600 Strong transcription Osteobl bone
14 chr2:54021000-54047200 Strong transcription Primary B cells from peripheral blood blood
15 chr2:54021000-54047200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:54021000-54047400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr2:54021000-54048000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:54021200-54047200 Strong transcription Placenta Placenta
19 chr2:54021200-54047600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:54021400-54047000 Strong transcription Primary T helper cells PMA-I stimulated --
21 chr2:54021400-54047000 Strong transcription Fetal Thymus thymus
22 chr2:54021600-54046400 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr2:54021800-54047600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr2:54022000-54039400 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr2:54022000-54044800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:54022000-54047000 Strong transcription Primary T cells fromperipheralblood blood
27 chr2:54022000-54047000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:54022000-54047200 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr2:54022000-54047600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:54022200-54039000 Strong transcription Fetal Intestine Large intestine
31 chr2:54022200-54046200 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr2:54022200-54046600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:54022200-54047200 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr2:54023000-54053800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:54024200-54043400 Strong transcription Dnd41 blood
36 chr2:54024800-54039600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:54024800-54045400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr2:54025000-54040000 Weak transcription K562 blood
39 chr2:54025800-54062000 Weak transcription Right Ventricle heart
40 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr2:54026600-54038000 Weak transcription Fetal Brain Male brain
42 chr2:54027200-54046400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr2:54028400-54044600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr2:54028600-54040800 Strong transcription Stomach Smooth Muscle stomach
45 chr2:54028600-54041000 Strong transcription Primary T cells from cord blood blood
46 chr2:54029400-54042800 Strong transcription Fetal Muscle Trunk muscle
47 chr2:54030200-54047200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:54030400-54037600 Weak transcription Brain Angular Gyrus brain
49 chr2:54030400-54041400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:54030400-54063000 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015