The 2.0 version of rSNPBase

Variant report

Variant rs805435
Chromosome Location chr2:54064783-54064784
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:54046600-54080200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:54046600-54080200 Weak transcription NHDF-Ad bronchial
4 chr2:54046800-54070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:54046800-54080400 Weak transcription Rectal Smooth Muscle rectum
6 chr2:54047000-54080200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:54047000-54080200 Weak transcription A549 lung
8 chr2:54047000-54080400 Weak transcription Gastric stomach
9 chr2:54047000-54080400 Weak transcription Pancreas Pancrea
10 chr2:54047000-54080800 Weak transcription Aorta Aorta
11 chr2:54047200-54067600 Weak transcription HSMM muscle
12 chr2:54047200-54070800 Weak transcription Placenta Placenta
13 chr2:54047200-54077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr2:54047200-54080000 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr2:54047200-54080200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:54047200-54080200 Weak transcription Muscle Satellite Cultured Cells --
17 chr2:54047200-54080200 Weak transcription Fetal Muscle Trunk muscle
18 chr2:54047200-54080400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:54047200-54080400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr2:54047200-54080800 Weak transcription Primary B cells from peripheral blood blood
21 chr2:54047600-54080400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:54047600-54080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:54048200-54065000 Weak transcription Stomach Smooth Muscle stomach
24 chr2:54050200-54080400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:54050400-54080200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr2:54050600-54080200 Weak transcription Fetal Stomach stomach
27 chr2:54051000-54080000 Weak transcription Osteobl bone
28 chr2:54054000-54066400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:54054000-54080400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr2:54054400-54080400 Weak transcription NHLF lung
31 chr2:54054800-54068400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:54055000-54075000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr2:54055200-54075000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:54055200-54080400 Weak transcription Ovary ovary
35 chr2:54055200-54081000 Weak transcription Psoas Muscle Psoas
36 chr2:54055400-54069200 Weak transcription Fetal Brain Male brain
37 chr2:54055400-54076400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:54055400-54080000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:54056200-54080200 Weak transcription Fetal Muscle Leg muscle
40 chr2:54056400-54066800 Weak transcription Fetal Intestine Small intestine
41 chr2:54056800-54080200 Weak transcription Brain Substantia Nigra brain
42 chr2:54057200-54070000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr2:54057200-54080200 Weak transcription Brain Angular Gyrus brain
44 chr2:54057200-54080200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr2:54057200-54080200 Weak transcription Fetal Brain Female brain
46 chr2:54057200-54080200 Weak transcription Left Ventricle heart
47 chr2:54057400-54080200 Weak transcription Brain Hippocampus Middle brain
48 chr2:54057600-54074800 Weak transcription HepG2 liver
49 chr2:54060000-54080200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:54060000-54080200 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015