The 2.0 version of rSNPBase

Variant report

Variant rs58364236
Chromosome Location chr13:50554308-50554309
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50538200-50558000 Weak transcription Fetal Muscle Trunk muscle
2 chr13:50539000-50570000 Weak transcription Fetal Intestine Small intestine
3 chr13:50540200-50562200 Weak transcription Adipose Nuclei Adipose
4 chr13:50540400-50569800 Weak transcription Primary T cells from cord blood blood
5 chr13:50543600-50570400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr13:50545400-50555800 Weak transcription Fetal Muscle Leg muscle
7 chr13:50545400-50559000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr13:50545800-50558000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr13:50545800-50562000 Weak transcription Fetal Intestine Large intestine
10 chr13:50546000-50569200 Weak transcription Primary B cells from cord blood blood
11 chr13:50546000-50570000 Weak transcription NHLF lung
12 chr13:50547600-50559800 Weak transcription Pancreas Pancrea
13 chr13:50547600-50561800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr13:50547600-50569800 Weak transcription Dnd41 blood
15 chr13:50549600-50556200 Weak transcription Fetal Thymus thymus
16 chr13:50550400-50557600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr13:50550800-50556000 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr13:50550800-50557600 Weak transcription Primary monocytes fromperipheralblood blood
19 chr13:50550800-50558000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr13:50550800-50562200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr13:50550800-50569600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr13:50550800-50569800 Weak transcription NH-A brain
23 chr13:50551000-50558000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr13:50551000-50558000 Weak transcription HSMMtube muscle
25 chr13:50551000-50559400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr13:50551000-50560800 Weak transcription Osteobl bone
27 chr13:50551000-50562000 Weak transcription HSMM muscle
28 chr13:50551000-50562800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr13:50551000-50569600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr13:50551000-50569600 Weak transcription Brain Hippocampus Middle brain
31 chr13:50551000-50569800 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:50551000-50569800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr13:50551000-50569800 Weak transcription Brain Cingulate Gyrus brain
34 chr13:50551000-50570000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr13:50551000-50570200 Weak transcription Placenta Amnion Placenta Amnion
36 chr13:50551200-50555600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr13:50551200-50562200 Weak transcription NHDF-Ad bronchial
38 chr13:50551200-50569600 Weak transcription Primary hematopoietic stem cells blood
39 chr13:50551400-50555800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr13:50551400-50558400 Weak transcription Thymus Thymus
41 chr13:50551400-50570200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:50552400-50568800 Weak transcription GM12878-XiMat blood
43 chr13:50552400-50570200 Weak transcription Lung lung
44 chr13:50552600-50554400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr13:50552600-50554400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr13:50552600-50558200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr13:50552800-50554400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr13:50552800-50558000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr13:50552800-50569800 Weak transcription Fetal Lung lung
50 chr13:50552800-50569800 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015