The 2.0 version of rSNPBase

Variant report

Variant rs58438537
Chromosome Location chr11:46924792-46924793
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46896600-46928200 Weak transcription Fetal Heart heart
2 chr11:46911200-46933800 Weak transcription Fetal Kidney kidney
3 chr11:46917800-46934000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr11:46917800-46934000 Weak transcription NHLF lung
5 chr11:46918200-46925400 Weak transcription Fetal Brain Male brain
6 chr11:46918400-46925600 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr11:46918800-46925400 Weak transcription HSMMtube muscle
8 chr11:46918800-46928000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr11:46918800-46934000 Weak transcription Colonic Mucosa Colon
10 chr11:46919800-46927800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr11:46920400-46928400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr11:46920600-46925200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr11:46921200-46928400 Weak transcription Fetal Brain Female brain
14 chr11:46921600-46925200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr11:46921600-46925400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:46921600-46925400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:46921600-46927400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr11:46921600-46928000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr11:46921600-46928000 Weak transcription Ovary ovary
20 chr11:46921600-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr11:46921600-46933800 Weak transcription NHEK skin
22 chr11:46921600-46934000 Weak transcription Rectal Smooth Muscle rectum
23 chr11:46921600-46934200 Weak transcription Esophagus oesophagus
24 chr11:46921600-46936000 Weak transcription Pancreas Pancrea
25 chr11:46921600-46936000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr11:46921800-46924800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr11:46921800-46928000 Weak transcription HepG2 liver
28 chr11:46921800-46934000 Weak transcription Fetal Intestine Large intestine
29 chr11:46921800-46938400 Weak transcription Gastric stomach
30 chr11:46922000-46925200 Weak transcription H1 Cell Line embryonic stem cell
31 chr11:46922000-46925200 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr11:46922000-46925200 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr11:46922000-46925400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:46922000-46925400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr11:46922000-46925800 Enhancers Brain Inferior Temporal Lobe brain
36 chr11:46922000-46928000 Weak transcription Placenta Placenta
37 chr11:46922000-46928200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr11:46922000-46928400 Weak transcription H9 Cell Line embryonic stem cell
39 chr11:46922000-46928400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr11:46922200-46925200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr11:46922200-46925200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr11:46922200-46934000 Weak transcription Duodenum Mucosa Duodenum
43 chr11:46922200-46934000 Weak transcription Fetal Intestine Small intestine
44 chr11:46922600-46925800 Enhancers Brain Cingulate Gyrus brain
45 chr11:46922800-46925600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr11:46923000-46925400 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr11:46923000-46926800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr11:46923000-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr11:46923200-46925400 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr11:46923200-46928200 Weak transcription Stomach Smooth Muscle stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015