Variant report
| Variant | rs58489211 |
|---|---|
| Chromosome Location | chr2:234318940-234318941 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:234270000-234322400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr2:234277600-234322200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr2:234297200-234319000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 4 | chr2:234297200-234319000 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr2:234297200-234319400 | Weak transcription | Brain Hippocampus Middle | brain |
| 6 | chr2:234297200-234322000 | Weak transcription | Hela-S3 | cervix |
| 7 | chr2:234297200-234322200 | Weak transcription | Brain Anterior Caudate | brain |
| 8 | chr2:234299200-234319200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr2:234299200-234319200 | Weak transcription | NHEK | skin |
| 10 | chr2:234301200-234319800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 11 | chr2:234303000-234319000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr2:234305400-234319000 | Weak transcription | HSMMtube | muscle |
| 13 | chr2:234305400-234319200 | Weak transcription | HSMM | muscle |
| 14 | chr2:234307200-234320200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 15 | chr2:234308400-234322200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 16 | chr2:234308800-234328400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr2:234309200-234319000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 18 | chr2:234309400-234319200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr2:234309400-234322000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 20 | chr2:234309600-234322200 | Weak transcription | Esophagus | oesophagus |
| 21 | chr2:234312600-234327400 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 22 | chr2:234315800-234319400 | Weak transcription | HepG2 | liver |
| 23 | chr2:234316000-234319000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr2:234316200-234319400 | Enhancers | Primary T cells fromperipheralblood | blood |
| 25 | chr2:234316400-234319200 | Enhancers | Thymus | Thymus |
| 26 | chr2:234316600-234319000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 27 | chr2:234316600-234319600 | Enhancers | Adipose Nuclei | Adipose |
| 28 | chr2:234316600-234319800 | Enhancers | Stomach Mucosa | stomach |
| 29 | chr2:234316600-234322000 | Weak transcription | Colon Smooth Muscle | Colon |
| 30 | chr2:234316800-234319000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr2:234316800-234319200 | Enhancers | Fetal Thymus | thymus |
| 32 | chr2:234317000-234319600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 33 | chr2:234317000-234319600 | Enhancers | Fetal Intestine Large | intestine |
| 34 | chr2:234317000-234319800 | Enhancers | Primary B cells from cord blood | blood |
| 35 | chr2:234317000-234320600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 36 | chr2:234317000-234327400 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 37 | chr2:234317200-234319200 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 38 | chr2:234317200-234319200 | Enhancers | Left Ventricle | heart |
| 39 | chr2:234317200-234319200 | Enhancers | Pancreas | Pancrea |
| 40 | chr2:234317200-234319200 | Enhancers | Dnd41 | blood |
| 41 | chr2:234317200-234319600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 42 | chr2:234317200-234327400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 43 | chr2:234317400-234319600 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 44 | chr2:234317400-234319800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 45 | chr2:234317400-234319800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 46 | chr2:234317400-234319800 | Enhancers | Fetal Intestine Small | intestine |
| 47 | chr2:234317600-234319200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 48 | chr2:234317600-234319400 | Enhancers | Primary hematopoietic stem cells | blood |
| 49 | chr2:234317600-234321200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 50 | chr2:234317600-234322200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
