The 2.0 version of rSNPBase

Variant report

Variant rs73995947
Chromosome Location chr2:234328149-234328150
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234308800-234328400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:234322400-234328800 Weak transcription Brain Germinal Matrix brain
3 chr2:234322400-234371800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:234323000-234328200 Weak transcription Fetal Brain Female brain
5 chr2:234323200-234336600 Weak transcription Brain Substantia Nigra brain
6 chr2:234323600-234328400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:234323600-234328800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:234323800-234334600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr2:234324200-234328400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:234324400-234335000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:234324400-234338400 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:234324800-234328400 Weak transcription HSMMtube muscle
13 chr2:234325600-234330600 Weak transcription HepG2 liver
14 chr2:234326000-234329600 Flanking Active TSS GM12878-XiMat blood
15 chr2:234326400-234328800 Enhancers Spleen Spleen
16 chr2:234326400-234331200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:234326400-234331600 Enhancers Fetal Thymus thymus
18 chr2:234326600-234328200 Genic enhancers Sigmoid Colon Sigmoid Colon
19 chr2:234326600-234330600 Flanking Active TSS Primary B cells from cord blood blood
20 chr2:234326800-234328400 Flanking Active TSS Stomach Mucosa stomach
21 chr2:234326800-234328600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:234326800-234330800 Enhancers Ovary ovary
23 chr2:234326800-234330800 Enhancers Small Intestine intestine
24 chr2:234326800-234331800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
25 chr2:234327000-234328400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:234327000-234329400 Flanking Active TSS Primary T cells from cord blood blood
27 chr2:234327000-234331000 Enhancers Placenta Placenta
28 chr2:234327200-234328200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr2:234327200-234328200 Genic enhancers Primary neutrophils fromperipheralblood blood
30 chr2:234327200-234328400 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr2:234327200-234328400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
32 chr2:234327200-234328600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
33 chr2:234327200-234329000 Flanking Active TSS Hela-S3 cervix
34 chr2:234327200-234329200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
35 chr2:234327200-234329200 Enhancers NHLF lung
36 chr2:234327200-234329400 Flanking Active TSS Primary B cells from peripheral blood blood
37 chr2:234327200-234329400 Flanking Active TSS Primary T cells fromperipheralblood blood
38 chr2:234327200-234329400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
39 chr2:234327200-234329400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
40 chr2:234327200-234329600 Flanking Active TSS Stomach Smooth Muscle stomach
41 chr2:234327200-234329800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
42 chr2:234327200-234330800 Enhancers Fetal Lung lung
43 chr2:234327200-234331200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
44 chr2:234327400-234328200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chr2:234327400-234328200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:234327400-234328200 Active TSS Colonic Mucosa Colon
47 chr2:234327400-234328400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:234327400-234328400 Flanking Active TSS Osteobl bone
49 chr2:234327400-234328600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:234327400-234328600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015