The 2.0 version of rSNPBase

Variant report

Variant rs58511825
Chromosome Location chr4:149074257-149074258
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:149018000-149085800 Weak transcription Stomach Mucosa stomach
2 chr4:149040600-149083200 Weak transcription Gastric stomach
3 chr4:149041400-149092000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr4:149041800-149074400 Weak transcription Lung lung
5 chr4:149045600-149104800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr4:149046400-149076600 Weak transcription Primary T cells fromperipheralblood blood
7 chr4:149046400-149085800 Weak transcription Rectal Smooth Muscle rectum
8 chr4:149046600-149075600 Weak transcription Duodenum Mucosa Duodenum
9 chr4:149046600-149087400 Weak transcription Aorta Aorta
10 chr4:149047000-149077200 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr4:149047400-149083800 Weak transcription Small Intestine intestine
12 chr4:149049400-149083000 Weak transcription Fetal Intestine Large intestine
13 chr4:149055000-149087400 Weak transcription Psoas Muscle Psoas
14 chr4:149062600-149075600 Weak transcription Colon Smooth Muscle Colon
15 chr4:149063000-149076400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr4:149063000-149087400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:149063200-149077000 Weak transcription Primary B cells from peripheral blood blood
18 chr4:149063200-149085600 Weak transcription Fetal Intestine Small intestine
19 chr4:149064200-149076200 Weak transcription Brain Angular Gyrus brain
20 chr4:149067600-149087400 Weak transcription Stomach Smooth Muscle stomach
21 chr4:149067800-149074600 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr4:149067800-149075000 Weak transcription Fetal Muscle Trunk muscle
23 chr4:149068000-149074400 Weak transcription Fetal Stomach stomach
24 chr4:149068000-149083200 Weak transcription Left Ventricle heart
25 chr4:149068000-149085800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr4:149068000-149085800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr4:149068000-149097400 Weak transcription Spleen Spleen
28 chr4:149068200-149087400 Weak transcription Esophagus oesophagus
29 chr4:149069200-149075200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr4:149069200-149087400 Weak transcription Adipose Nuclei Adipose
31 chr4:149069600-149081000 Weak transcription Pancreas Pancrea
32 chr4:149069800-149078400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr4:149071600-149079200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr4:149072200-149074800 Enhancers Brain Germinal Matrix brain
35 chr4:149072600-149074800 Strong transcription Liver Liver
36 chr4:149072800-149075800 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr4:149073200-149085800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr4:149073800-149075800 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr4:149073800-149076000 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr4:149073800-149081000 Weak transcription Fetal Kidney kidney
41 chr4:149074000-149074800 Strong transcription Fetal Muscle Leg muscle
42 chr4:149074000-149081200 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr4:149074200-149074600 Strong transcription Ovary ovary
44 chr4:149074200-149076000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr4:149074200-149080400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015