The 2.0 version of rSNPBase

Variant report

Variant rs28647457
Chromosome Location chr4:149063237-149063238
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:149018000-149085800 Weak transcription Stomach Mucosa stomach
2 chr4:149024000-149068600 Weak transcription Right Ventricle heart
3 chr4:149030800-149067000 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr4:149039400-149069400 Weak transcription Colonic Mucosa Colon
5 chr4:149040600-149083200 Weak transcription Gastric stomach
6 chr4:149041400-149067600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr4:149041400-149092000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr4:149041600-149069600 Weak transcription Brain Anterior Caudate brain
9 chr4:149041800-149074400 Weak transcription Lung lung
10 chr4:149045600-149104800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr4:149046400-149076600 Weak transcription Primary T cells fromperipheralblood blood
12 chr4:149046400-149085800 Weak transcription Rectal Smooth Muscle rectum
13 chr4:149046600-149066600 Weak transcription Ovary ovary
14 chr4:149046600-149075600 Weak transcription Duodenum Mucosa Duodenum
15 chr4:149046600-149087400 Weak transcription Aorta Aorta
16 chr4:149047000-149066800 Weak transcription Fetal Muscle Trunk muscle
17 chr4:149047000-149077200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr4:149047400-149066000 Weak transcription Pancreas Pancrea
19 chr4:149047400-149067200 Weak transcription Left Ventricle heart
20 chr4:149047400-149083800 Weak transcription Small Intestine intestine
21 chr4:149048800-149066600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr4:149049000-149066000 Weak transcription Stomach Smooth Muscle stomach
23 chr4:149049400-149083000 Weak transcription Fetal Intestine Large intestine
24 chr4:149049600-149072800 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr4:149050000-149065800 Weak transcription Liver Liver
26 chr4:149051800-149066800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr4:149053000-149066000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr4:149055000-149066400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr4:149055000-149066400 Weak transcription Adipose Nuclei Adipose
30 chr4:149055000-149073600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr4:149055000-149087400 Weak transcription Psoas Muscle Psoas
32 chr4:149055600-149067400 Weak transcription Brain Hippocampus Middle brain
33 chr4:149060200-149067400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr4:149060800-149067200 Weak transcription Esophagus oesophagus
35 chr4:149061000-149066000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr4:149061600-149063600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr4:149061800-149067400 Weak transcription Fetal Stomach stomach
38 chr4:149062600-149075600 Weak transcription Colon Smooth Muscle Colon
39 chr4:149063000-149064400 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr4:149063000-149076400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr4:149063000-149087400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr4:149063200-149064600 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr4:149063200-149065800 Weak transcription Fetal Muscle Leg muscle
44 chr4:149063200-149077000 Weak transcription Primary B cells from peripheral blood blood
45 chr4:149063200-149085600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015