The 2.0 version of rSNPBase

Variant report

Variant rs28371967
Chromosome Location chr4:148973827-148973828
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148939400-148978600 Weak transcription Ovary ovary
2 chr4:148947600-148980800 Weak transcription Pancreas Pancrea
3 chr4:148948600-148978000 Weak transcription NHLF lung
4 chr4:148952000-148993600 Weak transcription NHDF-Ad bronchial
5 chr4:148960000-148993200 Weak transcription Thymus Thymus
6 chr4:148963200-148975400 Weak transcription Fetal Intestine Small intestine
7 chr4:148963600-148981800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr4:148964000-148974800 Weak transcription Fetal Kidney kidney
9 chr4:148964000-148978200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr4:148964400-148975200 Weak transcription Fetal Intestine Large intestine
11 chr4:148964400-148977200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr4:148965400-148978000 Weak transcription Brain Substantia Nigra brain
13 chr4:148965400-148984200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr4:148965800-148974000 Weak transcription Lung lung
15 chr4:148965800-148974600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr4:148965800-148981000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr4:148966000-148974600 Weak transcription Muscle Satellite Cultured Cells --
18 chr4:148966200-148978000 Weak transcription Brain Hippocampus Middle brain
19 chr4:148966400-148977800 Weak transcription NHEK skin
20 chr4:148966400-148979800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr4:148966600-149003800 Weak transcription NH-A brain
22 chr4:148967200-148977200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr4:148968400-149004000 Weak transcription HUVEC blood vessel
24 chr4:148968600-148978200 Weak transcription Esophagus oesophagus
25 chr4:148968800-148975200 Weak transcription Duodenum Mucosa Duodenum
26 chr4:148968800-148978000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr4:148968800-148978000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr4:148968800-148980400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr4:148969600-148978200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr4:148970000-148974200 Weak transcription Stomach Smooth Muscle stomach
31 chr4:148970000-148974400 Weak transcription Colon Smooth Muscle Colon
32 chr4:148970000-148977800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:148970000-148978200 Weak transcription Brain Anterior Caudate brain
34 chr4:148970000-148985800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:148970200-148974800 Weak transcription Rectal Smooth Muscle rectum
36 chr4:148970400-148985800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr4:148970600-148974200 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr4:148970600-148974400 Weak transcription Fetal Muscle Trunk muscle
39 chr4:148970600-148974800 Weak transcription Aorta Aorta
40 chr4:148970600-148975400 Weak transcription Adipose Nuclei Adipose
41 chr4:148970800-148974800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:148970800-148975600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr4:148970800-148976400 Weak transcription Fetal Stomach stomach
44 chr4:148970800-148977800 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr4:148970800-148980800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr4:148971000-148975600 Weak transcription GM12878-XiMat blood
47 chr4:148971200-148974200 Weak transcription HSMM muscle
48 chr4:148971200-148978000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr4:148971800-148981600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr4:148971800-148981600 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015