Variant report

Variant rs58582622
Chromosome Location chr17:59551910-59551911
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59543200-59564800 Genic enhancers NHLF lung
2 chr17:59545600-59563000 Weak transcription Lung lung
3 chr17:59546600-59552200 Weak transcription Placenta Placenta
4 chr17:59548200-59563400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr17:59548400-59552400 Weak transcription HepG2 liver
6 chr17:59548600-59554000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr17:59548800-59552600 Weak transcription Fetal Intestine Large intestine
8 chr17:59550600-59554800 Genic enhancers Fetal Lung lung
9 chr17:59550800-59552800 Genic enhancers Fetal Muscle Leg muscle
10 chr17:59550800-59553000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
11 chr17:59551000-59553600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr17:59551000-59554400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr17:59551200-59553400 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr17:59551200-59553400 Enhancers NHDF-Ad bronchial
15 chr17:59551200-59554600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr17:59551400-59552400 Weak transcription Fetal Muscle Trunk muscle
17 chr17:59551600-59552000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
18 chr17:59551600-59552000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
19 chr17:59551600-59552000 Flanking Active TSS HMEC breast
20 chr17:59551600-59552600 Enhancers Esophagus oesophagus
21 chr17:59551600-59552600 Flanking Active TSS NHEK skin
22 chr17:59551800-59552200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr17:59551800-59556800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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