Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10895874	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10895877	0.82[EUR][1000 genomes]
rs11226838	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11226839	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11226853	0.82[EUR][1000 genomes]
rs11226855	0.82[EUR][1000 genomes]
rs11226859	0.82[EUR][1000 genomes]
rs11822168	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12271335	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12284317	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12285171	0.82[EUR][1000 genomes]
rs12288055	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1938959	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1938969	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1939150	0.82[EUR][1000 genomes]
rs2000524	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2155042	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2226567	0.82[EUR][1000 genomes]
rs3819071	0.82[EUR][1000 genomes]
rs41375749	0.82[EUR][1000 genomes]
rs4495866	0.82[EUR][1000 genomes]
rs4755117	0.84[EUR][1000 genomes]
rs61900352	0.84[EUR][1000 genomes]
rs61902560	0.82[EUR][1000 genomes]
rs61902561	0.82[EUR][1000 genomes]
rs637648	0.80[EUR][1000 genomes]
rs7126373	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832256	chr11:105516593-105689326	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1829261	chr11:105614894-105698982	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv898357	chr11:105614894-105709856	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105628600-105637400	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr11:105629000-105637400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr11:105634600-105638000	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr11:105634600-105638400	Weak transcription	Brain Substantia Nigra	brain
5	chr11:105634600-105653800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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