Variant report

Variant	rs58733181
Chromosome Location	chr5:150939432-150939433
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10035812	0.96[ASN][1000 genomes]
rs10044879	0.96[ASN][1000 genomes]
rs12386479	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28393159	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28406331	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28464529	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28502007	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28506125	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28556596	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28736662	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56838504	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58108509	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58297526	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59016671	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59412412	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60163825	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60673682	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6860179	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6860376	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6860421	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6881602	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6883760	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:150908200-150948000	Strong transcription	HMEC	breast
2	chr5:150908400-150944000	Strong transcription	NHEK	skin
3	chr5:150909200-150942400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:150911600-150942800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:150918200-150945400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:150931000-150942800	Weak transcription	Brain Angular Gyrus	brain
7	chr5:150934200-150949600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr5:150936000-150940800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr5:150937000-150948600	Weak transcription	Right Atrium	heart
10	chr5:150937400-150939600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr5:150937600-150940800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:150937600-150948600	Weak transcription	Adipose Nuclei	Adipose
13	chr5:150938600-150941800	Strong transcription	Esophagus	oesophagus
14	chr5:150938800-150941000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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