Variant report
Variant | rs58838945 |
---|---|
Chromosome Location | chr15:74125050-74125051 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr15:74124139..74126479-chr15:74128351..74130285,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10519014 | 0.84[ASN][1000 genomes] |
rs11072444 | 0.84[ASN][1000 genomes] |
rs11632687 | 0.84[ASN][1000 genomes] |
rs11634236 | 0.84[ASN][1000 genomes] |
rs11635549 | 0.84[ASN][1000 genomes] |
rs11639352 | 0.84[ASN][1000 genomes] |
rs11855112 | 0.84[ASN][1000 genomes] |
rs11857351 | 0.84[ASN][1000 genomes] |
rs12904100 | 0.84[ASN][1000 genomes] |
rs12913670 | 0.84[ASN][1000 genomes] |
rs12914022 | 0.84[ASN][1000 genomes] |
rs12915342 | 0.84[ASN][1000 genomes] |
rs12915712 | 0.84[ASN][1000 genomes] |
rs12916637 | 0.84[ASN][1000 genomes] |
rs16958352 | 0.84[ASN][1000 genomes] |
rs16958362 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16958372 | 0.84[ASN][1000 genomes] |
rs16958378 | 0.96[ASN][1000 genomes] |
rs2127016 | 0.84[ASN][1000 genomes] |
rs2127017 | 0.84[ASN][1000 genomes] |
rs34021526 | 0.84[ASN][1000 genomes] |
rs34617511 | 0.84[ASN][1000 genomes] |
rs35534436 | 0.84[ASN][1000 genomes] |
rs35905425 | 0.84[ASN][1000 genomes] |
rs41449350 | 0.96[ASN][1000 genomes] |
rs62004658 | 0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1043335 | chr15:74078689-74241186 | Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 17 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr15:74122600-74128600 | Weak transcription | Spleen | Spleen |